RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 GLRA2P23416 452 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 HOXA11P31270 313 aaPredicted RBP19.61■□□□□ 0.73
USHBP1-209ENST00000598570 GRB10Q13322 594 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 KCNK18Q7Z418 384 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 ZNF598Q86UK7 904 aaKnown RBP19.61■□□□□ 0.73
USHBP1-209ENST00000598570 SNX29Q8TEQ0 813 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 CLP1Q92989 425 aaKnown RBP19.61■□□□□ 0.73
USHBP1-209ENST00000598570 ZBED2Q9BTP6 218 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 CCSER1Q9C0I3 900 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 MINDY3Q9H8M7 445 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 DDX19AQ9NUU7 478 aaKnown RBP19.61■□□□□ 0.73
USHBP1-209ENST00000598570 FBXO2Q9UK22 296 aaPredicted RBP19.61■□□□□ 0.73
USHBP1-209ENST00000598570 DNM3Q9UQ16 869 aa19.61■□□□□ 0.73
USHBP1-209ENST00000598570 SRPRBQ9Y5M8 271 aaKnown RBP19.61■□□□□ 0.73
USHBP1-209ENST00000598570 A0A0U1RQF3 1178 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 ZNF623O75123 536 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 PPP2R2DQ66LE6 453 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 FAM173BQ6P4H8 233 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 C1orf186Q6ZWK4 172 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 ASAP3Q8TDY4 903 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 PPP1R16BQ96T49 567 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 TMEM161AQ9NX61 479 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
USHBP1-209ENST00000598570 MYH15Q9Y2K3 1946 aa19.6■□□□□ 0.73
USHBP1-209ENST00000598570 EOMESO95936 686 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 STAG3L1P0CL83 205 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 ZSCAN22P10073 491 aaPredicted RBP19.59■□□□□ 0.73
USHBP1-209ENST00000598570 SFPQP23246 707 aaKnown RBP eCLIP19.59■□□□□ 0.73
USHBP1-209ENST00000598570 GRIN1Q05586 938 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 CAPSQ13938 189 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 AMHR2Q16671 573 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 CDCA2Q69YH5 1023 aaPredicted RBP19.59■□□□□ 0.73
USHBP1-209ENST00000598570 SYT2Q8N9I0 419 aaPredicted RBP19.59■□□□□ 0.73
USHBP1-209ENST00000598570 KCNN1Q92952 543 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 USP28Q96RU2 1077 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 NT5C3AQ9H0P0 336 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 BHMT2Q9H2M3 363 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 AGPAT5Q9NUQ2 364 aa19.59■□□□□ 0.73
USHBP1-209ENST00000598570 FNDC1Q4ZHG4 1894 aaPredicted RBP19.58■□□□□ 0.73
USHBP1-209ENST00000598570 ARHGEF35A5YM69 484 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 C5orf67F2Z3F1 127 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 LPXNO60711 386 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 CSDE1O75534 798 aaKnown RBP19.58■□□□□ 0.72
USHBP1-209ENST00000598570 SRGAP2CP0DJJ0 459 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 TFDP1Q14186 410 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 ADGRE1Q14246 886 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 FAM187BQ17R55 369 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 ATL3Q6DD88 541 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 CMTR2Q8IYT2 770 aaKnown RBP19.58■□□□□ 0.72
USHBP1-209ENST00000598570 RNF149Q8NC42 400 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 ZNF668Q96K58 619 aaPredicted RBP19.58■□□□□ 0.72
USHBP1-209ENST00000598570 NLRP4Q96MN2 994 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 SAMD11Q96NU1 681 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 TGS1Q96RS0 853 aaKnown RBP19.58■□□□□ 0.72
USHBP1-209ENST00000598570 NTPCRQ9BSD7 190 aaKnown RBP19.58■□□□□ 0.72
USHBP1-209ENST00000598570 RNF19AQ9NV58 838 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 DACT1Q9NYF0 836 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 KCND2Q9NZV8 630 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 RALGAPA2Q2PPJ7 1873 aa19.58■□□□□ 0.72
USHBP1-209ENST00000598570 DENND3A2RUS2 1198 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 EPOPA6NHQ4 379 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 E9PMD0 336 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 USO1O60763 962 aaKnown RBP19.57■□□□□ 0.72
USHBP1-209ENST00000598570 GUCY2CP25092 1073 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 PHKA2P46019 1235 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 SLC12A3P55017 1021 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 MBTD1Q05BQ5 628 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 MAPK7Q13164 816 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 RINT1Q6NUQ1 792 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 SPRED2Q7Z698 418 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 MRPL10Q7Z7H8 261 aaKnown RBP19.57■□□□□ 0.72
USHBP1-209ENST00000598570 ECHDC2Q86YB7 292 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 DAW1Q8N136 415 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 LINC00301Q8NCQ3 95 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 LRRC15Q8TF66 581 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 RSPH1Q8WYR4 309 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 TIPINQ9BVW5 301 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 POLR3FQ9H1D9 316 aaPredicted RBP19.57■□□□□ 0.72
USHBP1-209ENST00000598570 FZD8Q9H461 694 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 GPRC5CQ9NQ84 441 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 ZDHHC9Q9Y397 364 aa19.57■□□□□ 0.72
USHBP1-209ENST00000598570 ADGRA3Q8IWK6 1321 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 UPP2O95045 317 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 F13A1P00488 732 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
USHBP1-209ENST00000598570 ATF7P17544 494 aaPredicted RBP19.56■□□□□ 0.72
USHBP1-209ENST00000598570 FGFR4P22455 802 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 AXLP30530 894 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 PKP1Q13835 747 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 FAM117BQ6P1L5 589 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 CABP7Q86V35 215 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 BSNDQ8WZ55 320 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 KIFAP3Q92845 792 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 YME1L1Q96TA2 773 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 PRDM12Q9H4Q4 367 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 BLOC1S4Q9NUP1 217 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 LMCD1Q9NZU5 365 aa19.56■□□□□ 0.72
USHBP1-209ENST00000598570 PCDHB7Q9Y5E2 793 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms