RNA–Protein interactions for RNA: ENST00000597552.1

TIMM50-208, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 369 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-208	ENST00000597552	CMTR2	Q8IYT2	770 aa	Known RBP	11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	RNF169	Q8NCN4	708 aa		11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	EDA	Q92838	391 aa		11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	NLRP4	Q96MN2	994 aa		11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	TMEM60	Q9H2L4	133 aa		11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	RNF19A	Q9NV58	838 aa		11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	CD207	Q9UJ71	328 aa		11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	PCDHB7	Q9Y5E2	793 aa		11.21	□□□□□ -0.61
TIMM50-208	ENST00000597552	WDFY4	Q6ZS81	3184 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	IGKV6-21	A0A0C4DH24	114 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	POTEM	A6NI47	508 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	TBX3	O15119	743 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	NEMF	O60524	1076 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	MAF	O75444	373 aa	Predicted RBP	11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	CD2BP2	O95400	341 aa	Known RBP	11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	ITGB1	P05556	798 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	P4HB	P07237	508 aa	Known RBP	11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	EIF4B	P23588	611 aa	Known RBP	11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	MCM7	P33993	719 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	PBX3	P40426	434 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	TXK	P42681	527 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	ADAM15	Q13444	863 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	SMAD4	Q13485	552 aa	Known RBP	11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	CAMK1	Q14012	370 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	NBR1	Q14596	966 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	EPHA7	Q15375	998 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	CALCRL	Q16602	461 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	LONRF3	Q496Y0	759 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	SPOUT1	Q5T280	376 aa	Known RBP	11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	SLC24A5	Q71RS6	500 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	ADGRD2	Q7Z7M1	963 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	KLHL23	Q8NBE8	558 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	PRSS33	Q8NF86	280 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	TMEM143	Q96AN5	459 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	C8orf76	Q96K31	380 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	CEP170P1	Q96L14	293 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	SNX27	Q96L92	541 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	CYP26B1	Q9NR63	512 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	C1orf112	Q9NSG2	853 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	RWDD3	Q9Y3V2	267 aa		11.2	□□□□□ -0.62
TIMM50-208	ENST00000597552	EIF5B	O60841	1220 aa	Known RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	ATF7	P17544	494 aa	Predicted RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	YWHAB	P31946	246 aa	Known RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	NDUFV1	P49821	464 aa		11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	POLG	P54098	1239 aa	Predicted RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	BMP8A	Q7Z5Y6	402 aa		11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	ECHDC2	Q86YB7	292 aa		11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	TPH2	Q8IWU9	490 aa		11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	PBXIP1	Q96AQ6	731 aa		11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	NAP1L4	Q99733	375 aa	Known RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	TTC12	Q9H892	705 aa	Predicted RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	ATP6V0A4	Q9HBG4	840 aa		11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	TYW1	Q9NV66	732 aa	Known RBP	11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	PLAGL2	Q9UPG8	496 aa		11.19	□□□□□ -0.62
TIMM50-208	ENST00000597552	TMEM221	A6NGB7	291 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	MEIS3P2	A8K0S8	358 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552		M0R296	226 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	SLITRK3	O94933	977 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	BAG4	O95429	457 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZSCAN20	P17040	1043 aa	Predicted RBP	11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	RBM25	P49756	843 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	FAM189B	P81408	668 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	EMC2	Q15006	297 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZNF174	Q15697	407 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	XKR9	Q5GH70	373 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	CLLU1OS	Q5K130	101 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	ODR4	Q5SWX8	454 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	LRRC55	Q6ZSA7	311 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	TRIM67	Q6ZTA4	783 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	C4orf19	Q8IY42	314 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	SLFN12	Q8IYM2	578 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	SPPL3	Q8TCT6	385 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	HELQ	Q8TDG4	1101 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	POF1B	Q8WVV4	589 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	LPP	Q93052	612 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	MSLNL	Q96KJ4	702 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	CASD1	Q96PB1	797 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	MTMR9	Q96QG7	549 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	PLVAP	Q9BX97	442 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	DHX33	Q9H6R0	707 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	CWH43	Q9H720	699 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	MINDY3	Q9H8M7	445 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	XPNPEP1	Q9NQW7	623 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	TMEM161A	Q9NX61	479 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	PCDHA12	Q9UN75	941 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	PIN4	Q9Y237	131 aa	Known RBP	11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	COL4A3BP	Q9Y5P4	624 aa		11.18	□□□□□ -0.62
TIMM50-208	ENST00000597552	EYA4	O95677	639 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	SRGAP2C	P0DJJ0	459 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	DNM2	P50570	870 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	PTPN5	P54829	565 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	SUGP1	Q8IWZ8	645 aa	Known RBP	11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	FAM184A	Q8NB25	1140 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	COLGALT1	Q8NBJ5	622 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	PIGO	Q8TEQ8	1089 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	PRPF31	Q8WWY3	499 aa	Known RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms