RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 C12orf76Q8N812 135 aaPredicted RBP9.51□□□□□ -0.89
FARP1-217ENST00000596467 SLC22A17Q8WUG5 538 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 EVI5LQ96CN4 794 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 RIOX1Q9H6W3 641 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 SFXN1Q9H9B4 322 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 TBC1D17Q9HA65 648 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 NCDNQ9UBB6 729 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 MAD2L2Q9UI95 211 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 CDV3Q9UKY7 258 aaKnown RBP9.51□□□□□ -0.89
FARP1-217ENST00000596467 ST3GAL5Q9UNP4 418 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 SIT1Q9Y3P8 196 aa9.51□□□□□ -0.89
FARP1-217ENST00000596467 NOC2LQ9Y3T9 749 aaKnown RBP9.51□□□□□ -0.89
FARP1-217ENST00000596467 GREB1Q4ZG55 1949 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 SPAG17Q6Q759 2223 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 CEP295Q9C0D2 2601 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 PNMA6FA0A0J9YX94 578 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 PALM3A6NDB9 673 aaPredicted RBP9.5□□□□□ -0.89
FARP1-217ENST00000596467 MAFGO15525 162 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 NARSO43776 548 aaKnown RBP9.5□□□□□ -0.89
FARP1-217ENST00000596467 ATP9AO75110 1047 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 CXCL14O95715 111 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 IGHDP01880 384 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 CFHP08603 1231 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 SRFP11831 508 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 EPCAMP16422 314 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 MX1P20591 662 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 RFX1P22670 979 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 POLGP54098 1239 aaPredicted RBP9.5□□□□□ -0.89
FARP1-217ENST00000596467 DSC3Q14574 896 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 LETM2Q2VYF4 491 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 PLPPR4Q7Z2D5 763 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 CABP7Q86V35 215 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 PPFIBP1Q86W92 1011 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 MAML2Q8IZL2 1156 aaPredicted RBP9.5□□□□□ -0.89
FARP1-217ENST00000596467 RSPH1Q8WYR4 309 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 SECISBP2LQ93073 1101 aaKnown RBP9.5□□□□□ -0.89
FARP1-217ENST00000596467 ZBTB10Q96DT7 871 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 PCYT2Q99447 389 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 RHOBTB2Q9BYZ6 727 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 ZBP1Q9H171 429 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 TMEM134Q9H6X4 195 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 RNF19AQ9NV58 838 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 FBXO4Q9UKT5 387 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 PCDHGA2Q9Y5H1 932 aa9.5□□□□□ -0.89
FARP1-217ENST00000596467 A0A0D9SFI3 127 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 SMAPO00193 183 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 PIK3CDO00329 1044 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 ZNF213O14771 459 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 NDUFV2P19404 249 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 PBX3P40426 434 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 ALDH7A1P49419 539 aaKnown RBP9.49□□□□□ -0.89
FARP1-217ENST00000596467 SLC26A2P50443 739 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 COL9A2Q14055 689 aaPredicted RBP9.49□□□□□ -0.89
FARP1-217ENST00000596467 PLCB4Q15147 1175 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 TUSC1Q2TAM9 212 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 KANK3Q6NY19 840 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 MTHFD1LQ6UB35 978 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 TMC5Q6UXY8 1006 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 CYP26C1Q6V0L0 522 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 ABI1Q8IZP0 508 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 SLC44A3Q8N4M1 653 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 RDH13Q8NBN7 331 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 TMEM40Q8WWA1 233 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 CCDC97Q96F63 343 aaPredicted RBP9.49□□□□□ -0.89
FARP1-217ENST00000596467 CHAMP1Q96JM3 812 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 FAM227BQ96M60 508 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 PIGSQ96S52 555 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 AZI2Q9H6S1 392 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 ZSWIM5Q9P217 1185 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 EPS15L1Q9UBC2 864 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 ZFYVE26Q68DK2 2539 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 SALL3Q9BXA9 1300 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 WDFY3Q8IZQ1 3526 aa9.49□□□□□ -0.89
FARP1-217ENST00000596467 TDRD15B5MCY1 1934 aaKnown RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 DCDC2BA2VCK2 349 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 N4BP1O75113 896 aaKnown RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 DCNP07585 359 aaKnown RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 CTSAP10619 480 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 IBSPP21815 317 aaPredicted RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 TGM1P22735 817 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 CRYBB1P53674 252 aaPredicted RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 MFAP1P55081 439 aaKnown RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 STARD6P59095 220 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 SLC35G1Q2M3R5 365 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 SPECC1Q5M775 1068 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 IFIT1BQ5T764 474 aaKnown RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 ZNF589Q86UQ0 364 aaPredicted RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 FAM228AQ86W67 206 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 HOMER1Q86YM7 354 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 KIAA0319LQ8IZA0 1049 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 VPS52Q8N1B4 723 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 TMEM87AQ8NBN3 555 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 ZBTB44Q8NCP5 570 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 CMASQ8NFW8 434 aaPredicted RBP9.48□□□□□ -0.89
FARP1-217ENST00000596467 PJA1Q8NG27 643 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 TRAPPC12Q8WVT3 735 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 NELL1Q92832 810 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 TMEM169Q96HH4 297 aa9.48□□□□□ -0.89
FARP1-217ENST00000596467 MRPL9Q9BYD2 267 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms