RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 E9PMD0 336 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 BRD1O95696 1058 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 MARCKSP29966 332 aaPredicted RBP20.26■□□□□ 0.83
ZNF558-204ENST00000596172 PTENP60484 403 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
ZNF558-204ENST00000596172 Q7L0L9 218 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 KCNK18Q7Z418 384 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 RNF149Q8NC42 400 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 ASAP3Q8TDY4 903 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 CALML4Q96GE6 196 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 CDK5RAP3Q96JB5 506 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 POLR3FQ9H1D9 316 aaPredicted RBP20.26■□□□□ 0.83
ZNF558-204ENST00000596172 MICAL3Q7RTP6 2002 aa20.26■□□□□ 0.83
ZNF558-204ENST00000596172 C9IYK1 514 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 YEATS4O95619 227 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 CA3P07451 260 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 STAG3L1P0CL83 205 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 ZSCAN20P17040 1043 aaPredicted RBP20.25■□□□□ 0.83
ZNF558-204ENST00000596172 GLRA2P23416 452 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 PHKA2P46019 1235 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 SARSP49591 514 aaKnown RBP20.25■□□□□ 0.83
ZNF558-204ENST00000596172 NPAS4Q8IUM7 802 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 KRI1Q8N9T8 703 aaKnown RBP20.25■□□□□ 0.83
ZNF558-204ENST00000596172 SP7Q8TDD2 431 aaPredicted RBP20.25■□□□□ 0.83
ZNF558-204ENST00000596172 TRAIPQ9BWF2 469 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 CSRNP2Q9H175 543 aa20.25■□□□□ 0.83
ZNF558-204ENST00000596172 PPP6R2O75170 966 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 CSDE1O75534 798 aaKnown RBP20.24■□□□□ 0.83
ZNF558-204ENST00000596172 UPP2O95045 317 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 CAPSQ13938 189 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 STK38Q15208 465 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 ZRSR1Q15695 479 aaKnown RBP20.24■□□□□ 0.83
ZNF558-204ENST00000596172 FAM102BQ5T8I3 360 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 FOXD4L5Q5VV16 416 aaPredicted RBP20.24■□□□□ 0.83
ZNF558-204ENST00000596172 PPP2R2DQ66LE6 453 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 FAM117BQ6P1L5 589 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 C1orf186Q6ZWK4 172 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 SYT2Q8N9I0 419 aaPredicted RBP20.24■□□□□ 0.83
ZNF558-204ENST00000596172 FOXD4L4Q8WXT5 416 aaPredicted RBP20.24■□□□□ 0.83
ZNF558-204ENST00000596172 KIFAP3Q92845 792 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 TIPINQ9BVW5 301 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 ELAC1Q9H777 363 aaKnown RBP20.24■□□□□ 0.83
ZNF558-204ENST00000596172 GPRC5CQ9NQ84 441 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 DACT1Q9NYF0 836 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 KCND2Q9NZV8 630 aa20.24■□□□□ 0.83
ZNF558-204ENST00000596172 TFIP11Q9UBB9 837 aaKnown RBP20.24■□□□□ 0.83
ZNF558-204ENST00000596172 ARID2Q68CP9 1835 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 SPTLC2O15270 562 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 DGKIO75912 1065 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 FGFR4P22455 802 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 TAP1Q03518 808 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 RINT1Q6NUQ1 792 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 MAEAQ7L5Y9 396 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 CATSPER4Q7RTX7 472 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 ZNF689Q96CS4 500 aaPredicted RBP20.23■□□□□ 0.83
ZNF558-204ENST00000596172 YME1L1Q96TA2 773 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 MINDY3Q9H8M7 445 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 RC3H2Q9HBD1 1191 aaKnown RBP20.23■□□□□ 0.83
ZNF558-204ENST00000596172 CFAP45Q9UL16 551 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 ZDHHC9Q9Y397 364 aa20.23■□□□□ 0.83
ZNF558-204ENST00000596172 A0A0U1RQF3 1178 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 LCHNA4D1U4 455 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 PLA2G4BP0C869 781 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 GUCY2CP25092 1073 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 SLC12A3P55017 1021 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 PPP2R5AQ15172 486 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 EPSTI1Q96J88 318 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 CLIC6Q96NY7 704 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 AGPAT5Q9NUQ2 364 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 TMEM161AQ9NX61 479 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 PCDHB7Q9Y5E2 793 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 TTC3P53804 2025 aa20.22■□□□□ 0.83
ZNF558-204ENST00000596172 LINC01553A4QN01 128 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 NAMPTP43490 491 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 GRIN2CQ14957 1233 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 KARSQ15046 597 aaKnown RBP20.21■□□□□ 0.83
ZNF558-204ENST00000596172 CDCA2Q69YH5 1023 aaPredicted RBP20.21■□□□□ 0.83
ZNF558-204ENST00000596172 USP49Q70CQ1 688 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 SYMPKQ92797 1274 aaKnown RBP20.21■□□□□ 0.83
ZNF558-204ENST00000596172 GUCD1Q96NT3 240 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 PLIN2Q99541 437 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 C17orf75Q9HAS0 396 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 CCDC39Q9UFE4 941 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 LRFN2Q9ULH4 789 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 PTPRSQ13332 1948 aa20.21■□□□□ 0.83
ZNF558-204ENST00000596172 COL4A6Q14031 1691 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 LOXHD1Q8IVV2 1947 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 ARHGEF15O94989 841 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 EOMESO95936 686 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 SKIP12755 728 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 PLCG1P19174 1290 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 AXLP30530 894 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 HOXA11P31270 313 aaPredicted RBP20.2■□□□□ 0.82
ZNF558-204ENST00000596172 DDIT3P35638 169 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 TXLNAP40222 546 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 MBTD1Q05BQ5 628 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 ECHDC2Q86YB7 292 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 KCNG4Q8TDN1 519 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 IFT74Q96LB3 600 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms