RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SHHQ15465 462 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 TCTN1Q2MV58 587 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 GPBP1Q86WP2 473 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 RNF149Q8NC42 400 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 SEPT8Q92599 483 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 KIFAP3Q92845 792 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 GCOM2Q9BZD3 368 aaPredicted RBP21.4■■□□□ 1.02
PNKP-207ENST00000596014 PADI3Q9ULW8 664 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 COLQQ9Y215 455 aaPredicted RBP21.4■■□□□ 1.02
PNKP-207ENST00000596014 A0A1B0GVL5 298 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 HIP1RO75146 1068 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 RAD51AP2Q09MP3 1159 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 CAPSQ13938 189 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 TPRNQ4KMQ1 711 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 SV2BQ7L1I2 683 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 DAW1Q8N136 415 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 IQUBQ8NA54 791 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 DHX58Q96C10 678 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 TIPINQ9BVW5 301 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 LAMA3Q16787 3333 aa21.4■■□□□ 1.02
PNKP-207ENST00000596014 TRIOBPQ9H2D6 2365 aa21.39■■□□□ 1.02
PNKP-207ENST00000596014 NPHP3-ACAD11A0A0J9YXS1 232 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 ACTN1P12814 892 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 PFKFB1P16118 471 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 POU5F1BQ06416 359 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 PAK2Q13177 524 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 TFDP1Q14186 410 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 BSNDQ8WZ55 320 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 HERVK_113Q902F9 699 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 ST3GAL5Q9UNP4 418 aa21.39■■□□□ 1.01
PNKP-207ENST00000596014 GPR182O15218 404 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 CSDE1O75534 798 aaKnown RBP21.38■■□□□ 1.01
PNKP-207ENST00000596014 NFX1Q12986 1120 aaKnown RBP21.38■■□□□ 1.01
PNKP-207ENST00000596014 MAPK7Q13164 816 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 IKBKEQ14164 716 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 FAM228AQ86W67 206 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 APBB2Q92870 758 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 DRC1Q96MC2 740 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 INO80BQ9C086 356 aaPredicted RBP21.38■■□□□ 1.01
PNKP-207ENST00000596014 CUEDC2Q9H467 287 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 HPSEQ9Y251 543 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 MICAL3Q7RTP6 2002 aa21.38■■□□□ 1.01
PNKP-207ENST00000596014 FAM237AA0A1B0GTK4 181 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 PHKA2P46019 1235 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 PTENP60484 403 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 CSPP1Q1MSJ5 1256 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 SRGAP1Q7Z6B7 1085 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 TDHQ8IZJ6 230 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 GBP4Q96PP9 640 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 REEP2Q9BRK0 252 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 PYM1Q9BRP8 204 aaKnown RBP21.37■■□□□ 1.01
PNKP-207ENST00000596014 MINDY3Q9H8M7 445 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 ERVK-5Q9HDB9 667 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 ABHD14A-ACY1A0A1B0GW23 586 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 GOLGA6L4A6NEF3 574 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 SFI1A8K8P3 1242 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 BAIAP3O94812 1187 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 NDUFA8P51970 172 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 CACNB1Q02641 598 aaPredicted RBP21.37■■□□□ 1.01
PNKP-207ENST00000596014 GIT2Q14161 759 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 PPP2R5AQ15172 486 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 ODR4Q5SWX8 454 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 RASIP1Q5U651 963 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 IFNLR1Q8IU57 520 aaPredicted RBP21.37■■□□□ 1.01
PNKP-207ENST00000596014 FSIP1Q8NA03 581 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 MRPS27Q92552 414 aaKnown RBP21.37■■□□□ 1.01
PNKP-207ENST00000596014 IFT74Q96LB3 600 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 C17orf75Q9HAS0 396 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 KBTBD4Q9NVX7 518 aa21.37■■□□□ 1.01
PNKP-207ENST00000596014 CXXC1Q9P0U4 656 aaPredicted RBP21.37■■□□□ 1.01
PNKP-207ENST00000596014 MYMKA6NI61 221 aa21.36■■□□□ 1.01
PNKP-207ENST00000596014 LRRIQ4A6NIV6 560 aa21.36■■□□□ 1.01
PNKP-207ENST00000596014 KRT18P05783 430 aaKnown RBP21.36■■□□□ 1.01
PNKP-207ENST00000596014 FGFR4P22455 802 aa21.36■■□□□ 1.01
PNKP-207ENST00000596014 NAMPTP43490 491 aa21.36■■□□□ 1.01
PNKP-207ENST00000596014 RNPC3Q96LT9 517 aaKnown RBP21.36■■□□□ 1.01
PNKP-207ENST00000596014 NFKBIZQ9BYH8 718 aa21.36■■□□□ 1.01
PNKP-207ENST00000596014 TMX1Q9H3N1 280 aa21.36■■□□□ 1.01
PNKP-207ENST00000596014 ODF2LQ9ULJ1 636 aa21.36■■□□□ 1.01
PNKP-207ENST00000596014 SYKP43405 635 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 PEX3P56589 373 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 DYMQ7RTS9 669 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 DDX12PQ92771 950 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 STAMQ92783 540 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 FTHL17Q9BXU8 183 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 MTIF3Q9H2K0 278 aaKnown RBP21.35■■□□□ 1.01
PNKP-207ENST00000596014 TNMDQ9H2S6 317 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 GOLPH3LQ9H4A5 285 aa21.35■■□□□ 1.01
PNKP-207ENST00000596014 A0A1W2PPC1 479 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 ZBBXA8MT70 800 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 EFCAB14O75071 495 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 SFPQP23246 707 aaKnown RBP eCLIP21.34■■□□□ 1.01
PNKP-207ENST00000596014 SERTAD1Q9UHV2 236 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 INO80B-WBP1J3KQ70 363 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 SLFN14P0C7P3 912 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 PLS3P13797 630 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 NPTX2P47972 431 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 MBTD1Q05BQ5 628 aa21.34■■□□□ 1.01
PNKP-207ENST00000596014 DMP1Q13316 513 aaPredicted RBP21.34■■□□□ 1.01
PNKP-207ENST00000596014 LONRF3Q496Y0 759 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms