RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 KLHL5Q96PQ7 755 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 MYADMQ96S97 322 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 FOXQ1Q9C009 403 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 ZNF302Q9NR11 478 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 COL1A2P08123 1366 aa15.62■□□□□ 0.09
SHKBP1-208ENST00000595726 FRYQ5TBA9 3013 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 GALTP07902 379 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 CYP21A2P08686 494 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 CNPP09543 421 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 EIF4BP23588 611 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 POLGP54098 1239 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 ANTXR2P58335 489 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 VARS2Q5ST30 1063 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 PPFIBP1Q86W92 1011 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 SKAP1Q86WV1 359 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 LRRC71Q8N4P6 559 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 CTCFLQ8NI51 663 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 RUFY2Q8WXA3 655 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 LPPQ93052 612 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 NRDE2Q9H7Z3 1164 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 NCDNQ9UBB6 729 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 DNAJB4Q9UDY4 337 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 AKT3Q9Y243 479 aa15.61■□□□□ 0.09
SHKBP1-208ENST00000595726 ATRXP46100 2492 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 SGSM2O43147 1006 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 B4GALT3O60512 393 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 KINO60870 393 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 SRFP11831 508 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 RXRAP19793 462 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 KIF5BP33176 963 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 GIT2Q14161 759 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 CEP55Q53EZ4 464 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 KIAA0319Q5VV43 1072 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 PHLDB3Q6NSJ2 640 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 EFCAB12Q6NXP0 572 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 ZNF654Q8IZM8 581 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 MRPL9Q9BYD2 267 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 GBP3Q9H0R5 595 aa15.6■□□□□ 0.09
SHKBP1-208ENST00000595726 C2orf16Q68DN1 1984 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 CCDC195A0A1B0GUA6 201 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 MEIS3P2A8K0S8 358 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 E7EWF7 191 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 MEIS1O00470 390 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 SMARCA1P28370 1054 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 SLC11A1P49279 550 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 SART3Q15020 963 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 DCLRE1AQ6PJP8 1040 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 C15orf39Q6ZRI6 1047 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 RALYLQ86SE5 291 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 RAB11FIP4Q86YS3 637 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 WDR6Q9NNW5 1121 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 ARHGEF3Q9NR81 526 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 INPP5FQ9Y2H2 1132 aa15.59■□□□□ 0.09
SHKBP1-208ENST00000595726 C2CD2LO14523 706 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 DHX15O43143 795 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 LILRB3O75022 631 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 RFPL2O75678 378 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 PTH1RQ03431 593 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 NONOQ15233 471 aaKnown RBP eCLIP15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 MIS18BP1Q6P0N0 1132 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 HEATR3Q7Z4Q2 680 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 ZNF280BQ86YH2 543 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 PJA1Q8NG27 643 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 EMILIN2Q9BXX0 1053 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 MAN1C1Q9NR34 630 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 TBC1D13Q9NVG8 400 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 EPS15L1Q9UBC2 864 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 FANCMQ8IYD8 2048 aa15.58■□□□□ 0.08
SHKBP1-208ENST00000595726 ZZEF1O43149 2961 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 SPATA31D3P0C874 917 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 DARSP14868 501 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 SPATA31D4Q6ZUB0 917 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 LINC01465Q8N7H1 131 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 NCOA7Q8NI08 942 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 BBXQ8WY36 941 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 CHAMP1Q96JM3 812 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 MAP3K14Q99558 947 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 LZTS2Q9BRK4 669 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 RPP25Q9BUL9 199 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 CDV3Q9UKY7 258 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 MTF2Q9Y483 593 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 MAFBQ9Y5Q3 323 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 U3KPZ7 1027 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 CLUHO75153 1309 aa15.57■□□□□ 0.08
SHKBP1-208ENST00000595726 DDAH1O94760 285 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 SDHBP21912 280 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 KCNA4P22459 653 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 PHKA2P46019 1235 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 GPC3P51654 580 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 AFF1P51825 1210 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 CSTF1Q05048 431 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 RNASELQ05823 741 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 COL9A3Q14050 684 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 BMP2KLQ5H9B9 411 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 NOMO2Q5JPE7 1267 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 TYW1BQ6NUM6 668 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 TAS1R1Q7RTX1 841 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
SHKBP1-208ENST00000595726 SCLT1Q96NL6 688 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms