RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 HAUS3Q68CZ6 603 aa18.95■□□□□ 0.62
LTBP4-209ENST00000594116 SWSAP1Q6NVH7 229 aa18.95■□□□□ 0.62
LTBP4-209ENST00000594116 USP49Q70CQ1 688 aa18.95■□□□□ 0.62
LTBP4-209ENST00000594116 CMTR2Q8IYT2 770 aaKnown RBP18.95■□□□□ 0.62
LTBP4-209ENST00000594116 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.95■□□□□ 0.62
LTBP4-209ENST00000594116 PABPC5Q96DU9 382 aaKnown RBP18.95■□□□□ 0.62
LTBP4-209ENST00000594116 HSD17B14Q9BPX1 270 aa18.95■□□□□ 0.62
LTBP4-209ENST00000594116 EIF2AK1Q9BQI3 630 aaKnown RBP18.95■□□□□ 0.62
LTBP4-209ENST00000594116 POLR3CQ9BUI4 534 aaPredicted RBP18.95■□□□□ 0.62
LTBP4-209ENST00000594116 PLVAPQ9BX97 442 aa18.95■□□□□ 0.62
LTBP4-209ENST00000594116 SAMM50Q9Y512 469 aa18.95■□□□□ 0.62
LTBP4-209ENST00000594116 MAFBQ9Y5Q3 323 aaPredicted RBP18.95■□□□□ 0.62
LTBP4-209ENST00000594116 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 STAG3L1P0CL83 205 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 ATP4AP20648 1035 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 CMA1P23946 247 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 RPA1P27694 616 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 CDC25AP30304 524 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 SPECC1Q5M775 1068 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 HYIQ5T013 277 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 KRT79Q5XKE5 535 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 KIAA0319LQ8IZA0 1049 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 SNX29Q8TEQ0 813 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 BBXQ8WY36 941 aaPredicted RBP18.94■□□□□ 0.62
LTBP4-209ENST00000594116 EPSTI1Q96J88 318 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 TUFT1Q9NNX1 390 aa18.94■□□□□ 0.62
LTBP4-209ENST00000594116 ARID2Q68CP9 1835 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 GRM6O15303 877 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 MED24O75448 989 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 P4HBP07237 508 aaKnown RBP18.93■□□□□ 0.62
LTBP4-209ENST00000594116 SPATA31C1P0DKV0 1188 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 MUTP22033 750 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 UBA7P41226 1012 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 UGCGQ16739 394 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 PUS10Q3MIT2 529 aaKnown RBP18.93■□□□□ 0.62
LTBP4-209ENST00000594116 CABP7Q86V35 215 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 P2RX5Q93086 422 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 DYDC2Q96IM9 177 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 TMX1Q9H3N1 280 aa18.93■□□□□ 0.62
LTBP4-209ENST00000594116 NCK2O43639 380 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 SLITRK3O94933 977 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 LYPLA2O95372 231 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 C22orf31O95567 290 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 CCT6AP40227 531 aaKnown RBP18.92■□□□□ 0.62
LTBP4-209ENST00000594116 QARSP47897 775 aaKnown RBP18.92■□□□□ 0.62
LTBP4-209ENST00000594116 PSMC5P62195 406 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 NAALADL2Q58DX5 795 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 ODR4Q5SWX8 454 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 PTCRAQ6ISU1 281 aaPredicted RBP18.92■□□□□ 0.62
LTBP4-209ENST00000594116 CATSPER3Q86XQ3 398 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 FAM178BQ8IXR5 827 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 CKAP2LQ8IYA6 745 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 PNMA5Q96PV4 448 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 LXNQ9BS40 222 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 ERVK-5Q9HDB9 667 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 LMBRD1Q9NUN5 540 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 RGL1Q9NZL6 768 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 GABBR1Q9UBS5 961 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 HPSEQ9Y251 543 aa18.92■□□□□ 0.62
LTBP4-209ENST00000594116 MRPL42Q9Y6G3 142 aaKnown RBP18.92■□□□□ 0.62
LTBP4-209ENST00000594116 FNDC1Q4ZHG4 1894 aaPredicted RBP18.92■□□□□ 0.62
LTBP4-209ENST00000594116 GRXCR2A6NFK2 248 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 GOLGA6L22H0YM25 854 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 GADD45BO75293 160 aaPredicted RBP18.91■□□□□ 0.62
LTBP4-209ENST00000594116 PRPF40AO75400 957 aaKnown RBP18.91■□□□□ 0.62
LTBP4-209ENST00000594116 RPS6KA5O75582 802 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 TXLNAP40222 546 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 SARSP49591 514 aaKnown RBP18.91■□□□□ 0.62
LTBP4-209ENST00000594116 UBE2HP62256 183 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 CYP4A11Q02928 519 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 CTTNQ14247 550 aaKnown RBP18.91■□□□□ 0.62
LTBP4-209ENST00000594116 ECM1Q16610 540 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 TMEM119Q4V9L6 283 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 C4orf19Q8IY42 314 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 KCTD17Q8N5Z5 321 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 TMEM40Q8WWA1 233 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 MRPS27Q92552 414 aaKnown RBP18.91■□□□□ 0.62
LTBP4-209ENST00000594116 FAM167AQ96KS9 214 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 ZSWIM4Q9H7M6 989 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 CDHR5Q9HBB8 845 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 FAM13BQ9NYF5 915 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 WRAP73Q9P2S5 460 aaPredicted RBP18.91■□□□□ 0.62
LTBP4-209ENST00000594116 GINS2Q9Y248 185 aa18.91■□□□□ 0.62
LTBP4-209ENST00000594116 NOC2LQ9Y3T9 749 aaKnown RBP18.91■□□□□ 0.62
LTBP4-209ENST00000594116 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 H3BQ06 376 aaPredicted RBP18.9■□□□□ 0.62
LTBP4-209ENST00000594116 ZNF862O60290 1169 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 DKC1O60832 514 aaKnown RBP eCLIP18.9■□□□□ 0.62
LTBP4-209ENST00000594116 STBD1O95210 358 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 IL9P15248 144 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 PFKFB1P16118 471 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 MCM4P33991 863 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 CRYBB1P53674 252 aaPredicted RBP18.9■□□□□ 0.62
LTBP4-209ENST00000594116 NFX1Q12986 1120 aaKnown RBP18.9■□□□□ 0.62
LTBP4-209ENST00000594116 KARSQ15046 597 aaKnown RBP18.9■□□□□ 0.62
LTBP4-209ENST00000594116 CTC1Q2NKJ3 1217 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 NT5C3AQ9H0P0 336 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 GOLPH3LQ9H4A5 285 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 EPHX3Q9H6B9 360 aa18.9■□□□□ 0.62
LTBP4-209ENST00000594116 CD320Q9NPF0 282 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms