RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 COPB2P35606 906 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 MAP2K2P36507 400 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 PLCB4Q15147 1175 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 RDH13Q8NBN7 331 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 RFFLQ8WZ73 363 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 FIZ1Q96SL8 496 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 INTS2Q9H0H0 1204 aaKnown RBP17.89■□□□□ 0.45
LIG1-206ENST00000594067 TDRD3Q9H7E2 651 aaKnown RBP17.89■□□□□ 0.45
LIG1-206ENST00000594067 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 KLC4Q9NSK0 619 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 TAS2R14Q9NYV8 317 aa17.89■□□□□ 0.45
LIG1-206ENST00000594067 DDX20Q9UHI6 824 aaKnown RBP17.89■□□□□ 0.45
LIG1-206ENST00000594067 UBAP1LF5GYI3 381 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 TRAPPC3O43617 180 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 PSMD10O75832 226 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 TMEM253P0C7T8 217 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 TMOD1P28289 359 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 ALDH1B1P30837 517 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 DRP2Q13474 957 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 RBM26Q5T8P6 1007 aaKnown RBP17.88■□□□□ 0.45
LIG1-206ENST00000594067 DCAF12L1Q5VU92 463 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 HS2ST1Q7LGA3 356 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 ZNF720Q7Z2F6 126 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 FAM178BQ8IXR5 827 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 CTNNBL1Q8WYA6 563 aaPredicted RBP17.88■□□□□ 0.45
LIG1-206ENST00000594067 AGPAT3Q9NRZ7 376 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 WRAP73Q9P2S5 460 aaPredicted RBP17.88■□□□□ 0.45
LIG1-206ENST00000594067 BCS1LQ9Y276 419 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 DDX3YO15523 660 aaKnown RBP17.88■□□□□ 0.45
LIG1-206ENST00000594067 PLS1Q14651 629 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 SLC15A2Q16348 729 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 SLC27A3Q5K4L6 730 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 CCDC174Q6PII3 467 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 BTNL9Q6UXG8 535 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 PALB2Q86YC2 1186 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 BANK1Q8NDB2 785 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 CD248Q9HCU0 757 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
LIG1-206ENST00000594067 NCANO14594 1321 aa17.88■□□□□ 0.45
LIG1-206ENST00000594067 ECE1P42892 770 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 PPATQ06203 517 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 DHX9Q08211 1270 aaKnown RBP17.87■□□□□ 0.45
LIG1-206ENST00000594067 BIRC3Q13489 604 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 QPCTQ16769 361 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 DACT2Q5SW24 774 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 C3orf20Q8ND61 904 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.455e-7■■□□□ 12.1
LIG1-206ENST00000594067 OSBPL7Q9BZF2 842 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 CNOT8Q9UFF9 292 aaKnown RBP17.87■□□□□ 0.45
LIG1-206ENST00000594067 FRMD4BQ9Y2L6 1034 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 UTP11Q9Y3A2 253 aaKnown RBP17.87■□□□□ 0.45
LIG1-206ENST00000594067 PIK3CDO00329 1044 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 GAS7O60861 476 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 LRRN2O75325 713 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 TNFAIP3P21580 790 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 ZNF211Q13398 564 aaPredicted RBP17.87■□□□□ 0.45
LIG1-206ENST00000594067 ODR4Q5SWX8 454 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 SAMD1Q6SPF0 538 aaPredicted RBP17.87■□□□□ 0.45
LIG1-206ENST00000594067 RUFY4Q6ZNE9 571 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 TMC3Q7Z5M5 1100 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 ZKSCAN4Q969J2 545 aaPredicted RBP17.87■□□□□ 0.45
LIG1-206ENST00000594067 SYT11Q9BT88 431 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 MKNK1Q9BUB5 465 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 THAP2Q9H0W7 228 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 CXorf56Q9H5V9 222 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 LRRC4CQ9HCJ2 640 aa17.87■□□□□ 0.45
LIG1-206ENST00000594067 CHUKO15111 745 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 PRELPP51888 382 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 MYL7Q01449 175 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 POU5F1Q01860 360 aaKnown RBP17.86■□□□□ 0.45
LIG1-206ENST00000594067 NFIL3Q16649 462 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 SPRED3Q2MJR0 410 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 ODF2Q5BJF6 829 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 KIAA1755Q5JYT7 1200 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 STRIP1Q5VSL9 837 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 SLC40A1Q9NP59 571 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 APEX2Q9UBZ4 518 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 NOVA2Q9UNW9 492 aaKnown RBP17.86■□□□□ 0.45
LIG1-206ENST00000594067 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 TRIM37O94972 964 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 MTMR3Q13615 1198 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 CCDC121Q6ZUS5 278 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 SLC5A5Q92911 643 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 FAM114A2Q9NRY5 505 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 DMAC2Q9NW81 257 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 SMCHD1A6NHR9 2005 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 FRMPD4Q14CM0 1322 aa17.86■□□□□ 0.45
LIG1-206ENST00000594067 DNM1LO00429 736 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 ECE2O60344 883 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 EXOC3O60645 756 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 PPP2R2AP63151 447 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 PPP2R5CQ13362 524 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 MEX3CQ5U5Q3 659 aaKnown RBP17.85■□□□□ 0.45
LIG1-206ENST00000594067 PHLDB3Q6NSJ2 640 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 HOOK2Q96ED9 719 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 MRIQ9BWK5 157 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 ERVK-5Q9HDB9 667 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 COG5Q9UP83 839 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 NRXN2Q9P2S2 1712 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 DCDC2CA8MYV0 355 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms