RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PPP6R2O75170 966 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 PAK2Q13177 524 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 RNF214Q8ND24 703 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 MCPH1Q8NEM0 835 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 ZNF668Q96K58 619 aaPredicted RBP21.76■■□□□ 1.07
LSM4-203ENST00000593829 CCSER1Q9C0I3 900 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 PADI3Q9ULW8 664 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 NOC2LQ9Y3T9 749 aaKnown RBP21.76■■□□□ 1.07
LSM4-203ENST00000593829 TRIOBPQ9H2D6 2365 aa21.76■■□□□ 1.07
LSM4-203ENST00000593829 RPS6KA5O75582 802 aa21.75■■□□□ 1.07
LSM4-203ENST00000593829 KCNJ6P48051 423 aa21.75■■□□□ 1.07
LSM4-203ENST00000593829 ODR4Q5SWX8 454 aa21.75■■□□□ 1.07
LSM4-203ENST00000593829 ZNF410Q86VK4 478 aa21.75■■□□□ 1.07
LSM4-203ENST00000593829 TMEM40Q8WWA1 233 aa21.75■■□□□ 1.07
LSM4-203ENST00000593829 PLIN2Q99541 437 aa21.75■■□□□ 1.07
LSM4-203ENST00000593829 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.75■■□□□ 1.07
LSM4-203ENST00000593829 ASAP2O43150 1006 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 EIF4BP23588 611 aaKnown RBP21.74■■□□□ 1.07
LSM4-203ENST00000593829 TMEM119Q4V9L6 283 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 SPECC1Q5M775 1068 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 KCNK18Q7Z418 384 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 KSR1Q8IVT5 923 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 RASSF8Q8NHQ8 419 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 KCNG4Q8TDN1 519 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 EPSTI1Q96J88 318 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 PRIMPOLQ96LW4 560 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 GCOM2Q9BZD3 368 aaPredicted RBP21.74■■□□□ 1.07
LSM4-203ENST00000593829 PTMAP06454 111 aaKnown RBP21.74■■□□□ 1.07
LSM4-203ENST00000593829 CYP11B2P19099 503 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 WDR5P61964 334 aaKnown RBP21.74■■□□□ 1.07
LSM4-203ENST00000593829 LAMTOR4Q0VGL1 99 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 MXD4Q14582 209 aaPredicted RBP21.74■■□□□ 1.07
LSM4-203ENST00000593829 SYMPKQ92797 1274 aaKnown RBP21.74■■□□□ 1.07
LSM4-203ENST00000593829 NLRP4Q96MN2 994 aa21.74■■□□□ 1.07
LSM4-203ENST00000593829 A0A087WZ62 844 aa21.73■■□□□ 1.07
LSM4-203ENST00000593829 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 GPR182O15218 404 aa21.73■■□□□ 1.07
LSM4-203ENST00000593829 GADD45BO75293 160 aaPredicted RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 DARSP14868 501 aaKnown RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 ARL2P36404 184 aa21.73■■□□□ 1.07
LSM4-203ENST00000593829 TXLNAP40222 546 aa21.73■■□□□ 1.07
LSM4-203ENST00000593829 RBM10P98175 930 aaKnown RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 NFX1Q12986 1120 aaKnown RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 KARSQ15046 597 aaKnown RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 FAM43BQ6ZT52 329 aaPredicted RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 USP49Q70CQ1 688 aa21.73■■□□□ 1.07
LSM4-203ENST00000593829 MAEAQ7L5Y9 396 aa21.73■■□□□ 1.07
LSM4-203ENST00000593829 FDXACB1Q9BRP7 624 aaPredicted RBP21.73■■□□□ 1.07
LSM4-203ENST00000593829 SRGAP2CP0DJJ0 459 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 ATP2A2P16615 1042 aaKnown RBP21.72■■□□□ 1.07
LSM4-203ENST00000593829 UBE2HP62256 183 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 KRT85P78386 507 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 MYRIPQ8NFW9 859 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 PHOSPHO2Q8TCD6 241 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 SLC9A7Q96T83 725 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 FTHL17Q9BXU8 183 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 POLR3FQ9H1D9 316 aaPredicted RBP21.72■■□□□ 1.07
LSM4-203ENST00000593829 ERVK-5Q9HDB9 667 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 FAM13BQ9NYF5 915 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 ST3GAL5Q9UNP4 418 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 FAM102BQ5T8I3 360 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 FAM228AQ86W67 206 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 INO80BQ9C086 356 aaPredicted RBP21.72■■□□□ 1.07
LSM4-203ENST00000593829 RCOR1Q9UKL0 485 aa21.72■■□□□ 1.07
LSM4-203ENST00000593829 CUTAO60888 179 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 PLCG1P19174 1290 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 SMAD3P84022 425 aaKnown RBP21.71■■□□□ 1.07
LSM4-203ENST00000593829 TFDP1Q14186 410 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 FAM109BQ6ICB4 259 aaPredicted RBP21.71■■□□□ 1.07
LSM4-203ENST00000593829 RNF149Q8NC42 400 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 ASAP3Q8TDY4 903 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 IFT122Q9HBG6 1241 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 GPRC5CQ9NQ84 441 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 LOXHD1Q8IVV2 1947 aa21.71■■□□□ 1.07
LSM4-203ENST00000593829 AMHP03971 560 aa21.7■■□□□ 1.07
LSM4-203ENST00000593829 SSBP05455 408 aaKnown RBP eCLIP21.7■■□□□ 1.07
LSM4-203ENST00000593829 PLA2G4BP0C869 781 aa21.7■■□□□ 1.07
LSM4-203ENST00000593829 GTF2F1P35269 517 aaKnown RBP eCLIP21.7■■□□□ 1.07
LSM4-203ENST00000593829 ME1P48163 572 aa21.7■■□□□ 1.07
LSM4-203ENST00000593829 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.7■■□□□ 1.076e-40■■■■■ 76.3
LSM4-203ENST00000593829 SYT2Q8N9I0 419 aaPredicted RBP21.7■■□□□ 1.07
LSM4-203ENST00000593829 LAMA3Q16787 3333 aa21.7■■□□□ 1.06
LSM4-203ENST00000593829 SOX1O00570 391 aaPredicted RBP21.7■■□□□ 1.06
LSM4-203ENST00000593829 CSDE1O75534 798 aaKnown RBP21.7■■□□□ 1.06
LSM4-203ENST00000593829 GLRA2P23416 452 aa21.7■■□□□ 1.06
LSM4-203ENST00000593829 DEFB103AP81534 67 aa21.7■■□□□ 1.06
LSM4-203ENST00000593829 RINT1Q6NUQ1 792 aa21.7■■□□□ 1.06
LSM4-203ENST00000593829 TMX1Q9H3N1 280 aa21.7■■□□□ 1.06
LSM4-203ENST00000593829 SPTLC3Q9NUV7 552 aa21.7■■□□□ 1.06
LSM4-203ENST00000593829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.69■■□□□ 1.06
LSM4-203ENST00000593829 GRXCR1A8MXD5 290 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 ENPP3O14638 875 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 PHKA2P46019 1235 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 SLC12A3P55017 1021 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 POU5F1BQ06416 359 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 C1orf186Q6ZWK4 172 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 SRGAP1Q7Z6B7 1085 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 RUSC1Q9BVN2 902 aa21.69■■□□□ 1.06
LSM4-203ENST00000593829 LAMA2P24043 3122 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms