RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 ANHXE9PGG2 379 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
RANBP3-230ENST00000593025 MEIS1O00470 390 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 KINO60870 393 aaKnown RBP12.21□□□□□ -0.45
RANBP3-230ENST00000593025 EIF4BP23588 611 aaKnown RBP12.21□□□□□ -0.45
RANBP3-230ENST00000593025 SMARCA1P28370 1054 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 SLC11A1P49279 550 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 NLRP11P59045 1033 aaKnown RBP12.21□□□□□ -0.45
RANBP3-230ENST00000593025 HTR4Q13639 388 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 COL9A3Q14050 684 aaPredicted RBP12.21□□□□□ -0.45
RANBP3-230ENST00000593025 GIT2Q14161 759 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 KIAA0319Q5VV43 1072 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 TYW1BQ6NUM6 668 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 PPFIBP1Q86W92 1011 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 NELL1Q92832 810 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 LPPQ93052 612 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 ZNF707Q96C28 371 aaPredicted RBP12.21□□□□□ -0.45
RANBP3-230ENST00000593025 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 LNPKQ9C0E8 428 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 SLC2A4RGQ9NR83 387 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 DIAPH3Q9NSV4 1193 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 TBC1D13Q9NVG8 400 aa12.21□□□□□ -0.45
RANBP3-230ENST00000593025 MYH9P35579 1960 aaKnown RBP12.21□□□□□ -0.46
RANBP3-230ENST00000593025 SPDYE3A6NKU9 549 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 BACH1O14867 736 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 LILRB5O75023 590 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 DARSP14868 501 aaKnown RBP12.2□□□□□ -0.46
RANBP3-230ENST00000593025 STARD6P59095 220 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 ZNF528Q3MIS6 628 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 CEP55Q53EZ4 464 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 PDXDC2PQ6P474 469 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 CATIPQ7Z7H3 387 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 ZNF280BQ86YH2 543 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 ZNF654Q8IZM8 581 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 LRRC71Q8N4P6 559 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 ZBTB44Q8NCP5 570 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 MAP3K14Q99558 947 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
RANBP3-230ENST00000593025 DDX23Q9BUQ8 820 aaKnown RBP12.2□□□□□ -0.46
RANBP3-230ENST00000593025 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 LY9Q9HBG7 655 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 ZNF302Q9NR11 478 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 MAN1C1Q9NR34 630 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 NCDNQ9UBB6 729 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 MTF2Q9Y483 593 aaPredicted RBP12.2□□□□□ -0.46
RANBP3-230ENST00000593025 MAFBQ9Y5Q3 323 aaPredicted RBP12.2□□□□□ -0.46
RANBP3-230ENST00000593025 DOCK6Q96HP0 2047 aa12.2□□□□□ -0.46
RANBP3-230ENST00000593025 SPTLC1O15269 473 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 RFPL2O75678 378 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 EFEMP2O95967 443 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 SSBP05455 408 aaKnown RBP eCLIP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 ZSCAN20P17040 1043 aaPredicted RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 GBP2P32456 591 aaPredicted RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 PHKA2P46019 1235 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 GPC3P51654 580 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 AFF1P51825 1210 aaKnown RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 HDAC1Q13547 482 aaPredicted RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 LONRF3Q496Y0 759 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 FAM160B1Q5W0V3 765 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 SWSAP1Q6NVH7 229 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 DCLRE1AQ6PJP8 1040 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 METTL13Q8N6R0 699 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 BBXQ8WY36 941 aaPredicted RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 EPC1Q9H2F5 836 aa12.19□□□□□ -0.46
RANBP3-230ENST00000593025 SEC63Q9UGP8 760 aaKnown RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
RANBP3-230ENST00000593025 MTCL1Q9Y4B5 1905 aaKnown RBP12.18□□□□□ -0.46
RANBP3-230ENST00000593025 IGLV3-22A0A075B6J6 115 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 E7EWF7 191 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 FAM86B1E9PN63 330 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 DDAH1O94760 285 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 FAM86B2P0C5J1 330 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 MYBP10242 640 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 LAMP2P13473 410 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 SDHBP21912 280 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 RFX1P22670 979 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 KLRC2P26717 231 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 LMNB2Q03252 620 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 PTH1RQ03431 593 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 DRP2Q13474 957 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 BMS1Q14692 1282 aaKnown RBP12.18□□□□□ -0.46
RANBP3-230ENST00000593025 TMEM87AQ8NBN3 555 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 CRYGNQ8WXF5 182 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 RTKNQ9BST9 563 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 TRAIPQ9BWF2 469 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 CDV3Q9UKY7 258 aaKnown RBP12.18□□□□□ -0.46
RANBP3-230ENST00000593025 PCDHGA2Q9Y5H1 932 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 NUMBLQ9Y6R0 609 aa12.18□□□□□ -0.46
RANBP3-230ENST00000593025 FASNP49327 2511 aaKnown RBP12.18□□□□□ -0.46
RANBP3-230ENST00000593025 PRR5-ARHGAP8B1AHC4 643 aa12.17□□□□□ -0.46
RANBP3-230ENST00000593025 INPPL1O15357 1258 aa12.17□□□□□ -0.46
RANBP3-230ENST00000593025 ZNF862O60290 1169 aa12.17□□□□□ -0.46
RANBP3-230ENST00000593025 OFD1O75665 1012 aa12.17□□□□□ -0.46
RANBP3-230ENST00000593025 DDHD2O94830 711 aa12.17□□□□□ -0.46
RANBP3-230ENST00000593025 HOXB3P14651 431 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms