RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 GCOM2Q9BZD3 368 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-206ENST00000592942 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
TRIM47-206ENST00000592942 ZNF576Q9H609 170 aa17.03■□□□□ 0.32
TRIM47-206ENST00000592942 POLD4Q9HCU8 107 aa17.03■□□□□ 0.32
TRIM47-206ENST00000592942 RGS18Q9NS28 235 aa17.03■□□□□ 0.32
TRIM47-206ENST00000592942 MSRAQ9UJ68 235 aa17.03■□□□□ 0.32
TRIM47-206ENST00000592942 DNM3Q9UQ16 869 aa17.03■□□□□ 0.32
TRIM47-206ENST00000592942 TMEM265A0A087WTH1 108 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 C9IYK1 514 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 TLL1O43897 1013 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 UPP2O95045 317 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 PTENP60484 403 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 POU5F1BQ06416 359 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 MXD4Q14582 209 aaPredicted RBP17.02■□□□□ 0.32
TRIM47-206ENST00000592942 SPECC1Q5M775 1068 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 FAM43BQ6ZT52 329 aaPredicted RBP17.02■□□□□ 0.32
TRIM47-206ENST00000592942 C1orf186Q6ZWK4 172 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 SPRED2Q7Z698 418 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 IFNLR1Q8IU57 520 aaPredicted RBP17.02■□□□□ 0.32
TRIM47-206ENST00000592942 RNF149Q8NC42 400 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
TRIM47-206ENST00000592942 SLC26A4O43511 780 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 CA3P07451 260 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 SLC12A3P55017 1021 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 TAP1Q03518 808 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 CAPSQ13938 189 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 BECN1Q14457 450 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 GRIN2CQ14957 1233 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-206ENST00000592942 ODR4Q5SWX8 454 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 ZNF697Q5TEC3 545 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 RINT1Q6NUQ1 792 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-206ENST00000592942 SRGAP1Q7Z6B7 1085 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 KCTD17Q8N5Z5 321 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 SYT2Q8N9I0 419 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-206ENST00000592942 MCPH1Q8NEM0 835 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 BSNDQ8WZ55 320 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 ZNF689Q96CS4 500 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-206ENST00000592942 FAM161BQ96MY7 647 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 GUCD1Q96NT3 240 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
TRIM47-206ENST00000592942 RC3H2Q9HBD1 1191 aaKnown RBP17.01■□□□□ 0.31
TRIM47-206ENST00000592942 BLOC1S4Q9NUP1 217 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 CHD9Q3L8U1 2897 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 CHD7Q9P2D1 2997 aa17.01■□□□□ 0.31
TRIM47-206ENST00000592942 HOXA11P31270 313 aaPredicted RBP17■□□□□ 0.31
TRIM47-206ENST00000592942 DDIT3P35638 169 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 UBA7P41226 1012 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
TRIM47-206ENST00000592942 ZRSR1Q15695 479 aaKnown RBP17■□□□□ 0.31
TRIM47-206ENST00000592942 SLC24A5Q71RS6 500 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 DAW1Q8N136 415 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 SP7Q8TDD2 431 aaPredicted RBP17■□□□□ 0.31
TRIM47-206ENST00000592942 CHAMP1Q96JM3 812 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 CCDC43Q96MW1 224 aaKnown RBP17■□□□□ 0.31
TRIM47-206ENST00000592942 ZNF396Q96N95 335 aaPredicted RBP17■□□□□ 0.31
TRIM47-206ENST00000592942 SCLT1Q96NL6 688 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 ZBED2Q9BTP6 218 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 RUSC1Q9BVN2 902 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 NFKBIZQ9BYH8 718 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 INO80BQ9C086 356 aaPredicted RBP17■□□□□ 0.31
TRIM47-206ENST00000592942 NT5C3AQ9H0P0 336 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 INSL6Q9Y581 213 aa17■□□□□ 0.31
TRIM47-206ENST00000592942 PPP6R2O75170 966 aa16.99■□□□□ 0.31
TRIM47-206ENST00000592942 DGKIO75912 1065 aa16.99■□□□□ 0.31
TRIM47-206ENST00000592942 SARSP49591 514 aaKnown RBP16.99■□□□□ 0.31
TRIM47-206ENST00000592942 DNM1Q05193 864 aaKnown RBP16.99■□□□□ 0.31
TRIM47-206ENST00000592942 ARSHQ5FYA8 562 aa16.99■□□□□ 0.31
TRIM47-206ENST00000592942 FAM102BQ5T8I3 360 aa16.99■□□□□ 0.31
TRIM47-206ENST00000592942 SLC28A3Q9HAS3 691 aa16.99■□□□□ 0.31
TRIM47-206ENST00000592942 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
TRIM47-206ENST00000592942 MYH15Q9Y2K3 1946 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 COL4A6Q14031 1691 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 SPTLC2O15270 562 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 YEATS4O95619 227 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 LINC00271P0C7V0 271 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 PLA2G4BP0C869 781 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 MAPK7Q13164 816 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 AMHR2Q16671 573 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 AXDND1Q5T1B0 1012 aaPredicted RBP16.98■□□□□ 0.31
TRIM47-206ENST00000592942 NPAS4Q8IUM7 802 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 KRI1Q8N9T8 703 aaKnown RBP16.98■□□□□ 0.31
TRIM47-206ENST00000592942 SYMPKQ92797 1274 aaKnown RBP16.98■□□□□ 0.31
TRIM47-206ENST00000592942 TRAIPQ9BWF2 469 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 CHST12Q9NRB3 414 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 C1orf112Q9NSG2 853 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 RNF19AQ9NV58 838 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 RCOR1Q9UKL0 485 aa16.98■□□□□ 0.31
TRIM47-206ENST00000592942 A0A087X0B3 334 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 A0A0U1RQF3 1178 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 DENND3A2RUS2 1198 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 LINC01553A4QN01 128 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 ZSCAN20P17040 1043 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-206ENST00000592942 PLCG1P19174 1290 aa16.97■□□□□ 0.31
TRIM47-206ENST00000592942 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRIM47-206ENST00000592942 ANP32AP39687 249 aaKnown RBP16.97■□□□□ 0.31
TRIM47-206ENST00000592942 GATMP50440 423 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms