RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 MICAL3Q7RTP6 2002 aa11.02□□□□□ -0.64
TPM4-216ENST00000592822 FAM237AA0A1B0GTK4 181 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 A0A1B0GVL5 298 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 A0A1W2PQ27 194 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 A0A1W2PQ64 194 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 A0A1W2PQD8 194 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 POLR2DO15514 142 aaKnown RBP11.02□□□□□ -0.65
TPM4-216ENST00000592822 HIP1RO75146 1068 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 CSDE1O75534 798 aaKnown RBP11.02□□□□□ -0.65
TPM4-216ENST00000592822 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 DARSP14868 501 aaKnown RBP11.02□□□□□ -0.65
TPM4-216ENST00000592822 PFKFB1P16118 471 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 RAD51AP2Q09MP3 1159 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 PAK2Q13177 524 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 RASIP1Q5U651 963 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 FAM228AQ86W67 206 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 RNF149Q8NC42 400 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 HERVK_113Q902F9 699 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 SEPT8Q92599 483 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 KIFAP3Q92845 792 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 DHX58Q96C10 678 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 GCOM2Q9BZD3 368 aaPredicted RBP11.02□□□□□ -0.65
TPM4-216ENST00000592822 TMX1Q9H3N1 280 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 KCND2Q9NZV8 630 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 CXXC1Q9P0U4 656 aaPredicted RBP11.02□□□□□ -0.65
TPM4-216ENST00000592822 KCNH3Q9ULD8 1083 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 ST3GAL5Q9UNP4 418 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 HPSEQ9Y251 543 aa11.02□□□□□ -0.65
TPM4-216ENST00000592822 PTPRSQ13332 1948 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 TRIOBPQ9H2D6 2365 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 SFI1A8K8P3 1242 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 FGFR4P22455 802 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 NDUFA8P51970 172 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 PTENP60484 403 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 POU5F1BQ06416 359 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 NFX1Q12986 1120 aaKnown RBP11.01□□□□□ -0.65
TPM4-216ENST00000592822 IKBKEQ14164 716 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 TFDP1Q14186 410 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 TPRNQ4KMQ1 711 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 RTN4RL1Q86UN2 441 aaPredicted RBP11.01□□□□□ -0.65
TPM4-216ENST00000592822 IFNLR1Q8IU57 520 aaPredicted RBP11.01□□□□□ -0.65
TPM4-216ENST00000592822 TDHQ8IZJ6 230 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 FSIP1Q8NA03 581 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 IQUBQ8NA54 791 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 APBB2Q92870 758 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 RNPC3Q96LT9 517 aaKnown RBP11.01□□□□□ -0.65
TPM4-216ENST00000592822 DRC1Q96MC2 740 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 REEP2Q9BRK0 252 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 TIPINQ9BVW5 301 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 GOLPH3LQ9H4A5 285 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 MINDY3Q9H8M7 445 aa11.01□□□□□ -0.65
TPM4-216ENST00000592822 ABHD14A-ACY1A0A1B0GW23 586 aa11□□□□□ -0.65
TPM4-216ENST00000592822 MYMKA6NI61 221 aa11□□□□□ -0.65
TPM4-216ENST00000592822 LRRIQ4A6NIV6 560 aa11□□□□□ -0.65
TPM4-216ENST00000592822 GPR182O15218 404 aa11□□□□□ -0.65
TPM4-216ENST00000592822 BAIAP3O94812 1187 aa11□□□□□ -0.65
TPM4-216ENST00000592822 ACTN1P12814 892 aa11□□□□□ -0.65
TPM4-216ENST00000592822 NAMPTP43490 491 aa11□□□□□ -0.65
TPM4-216ENST00000592822 PHKA2P46019 1235 aa11□□□□□ -0.65
TPM4-216ENST00000592822 PEX3P56589 373 aa11□□□□□ -0.65
TPM4-216ENST00000592822 WDR5P61964 334 aaKnown RBP11□□□□□ -0.65
TPM4-216ENST00000592822 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
TPM4-216ENST00000592822 GIT2Q14161 759 aa11□□□□□ -0.65
TPM4-216ENST00000592822 CDCA2Q69YH5 1023 aaPredicted RBP11□□□□□ -0.65
TPM4-216ENST00000592822 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11□□□□□ -0.65
TPM4-216ENST00000592822 SRGAP1Q7Z6B7 1085 aa11□□□□□ -0.65
TPM4-216ENST00000592822 LINC01599Q8WXQ3 324 aa11□□□□□ -0.65
TPM4-216ENST00000592822 MRPS27Q92552 414 aaKnown RBP11□□□□□ -0.65
TPM4-216ENST00000592822 STAMQ92783 540 aa11□□□□□ -0.65
TPM4-216ENST00000592822 NFKBIZQ9BYH8 718 aa11□□□□□ -0.65
TPM4-216ENST00000592822 CUEDC2Q9H467 287 aa11□□□□□ -0.65
TPM4-216ENST00000592822 KBTBD4Q9NVX7 518 aa11□□□□□ -0.65
TPM4-216ENST00000592822 ADGRA3Q8IWK6 1321 aa11□□□□□ -0.65
TPM4-216ENST00000592822 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.99□□□□□ -0.65
TPM4-216ENST00000592822 A0A1W2PPC1 479 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 ZBBXA8MT70 800 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 ENPP3O14638 875 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 ACTN4O43707 911 aaKnown RBP10.99□□□□□ -0.65
TPM4-216ENST00000592822 MGEA5O60502 916 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 KRT18P05783 430 aaKnown RBP10.99□□□□□ -0.65
TPM4-216ENST00000592822 SLFN14P0C7P3 912 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 PLS3P13797 630 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 SFPQP23246 707 aaKnown RBP eCLIP10.99□□□□□ -0.65
TPM4-216ENST00000592822 SYKP43405 635 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 NPTX2P47972 431 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 ZNF131P52739 623 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 MBTD1Q05BQ5 628 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 DSC3Q14574 896 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 PPP2R5AQ15172 486 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 LONRF3Q496Y0 759 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 ODR4Q5SWX8 454 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 CLEC17AQ6ZS10 378 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 DYMQ7RTS9 669 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 TMEM87AQ8NBN3 555 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 DDX12PQ92771 950 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 DNAJC19Q96DA6 116 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 IFT74Q96LB3 600 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 KIFC3Q9BVG8 833 aa10.99□□□□□ -0.65
TPM4-216ENST00000592822 FTHL17Q9BXU8 183 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms