RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 ALDH7A1P49419 539 aaKnown RBP22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 PCBP1Q15365 356 aaKnown RBP eCLIP22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 EPHA7Q15375 998 aa22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 TWF2Q6IBS0 349 aaKnown RBP22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 KCNT2Q6UVM3 1135 aa22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 RHPN2Q8IUC4 686 aa22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 C4orf19Q8IY42 314 aa22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 PSPC1Q8WXF1 523 aaKnown RBP22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 PGBD4Q96DM1 585 aa22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 CEP170P1Q96L14 293 aa22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 LRFN3Q9BTN0 628 aa22.09■■□□□ 1.13
TNFRSF11A-204ENST00000592013 WDR81Q562E7 1941 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 PRR33A8MZF0 331 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 SLC37A4O43826 429 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 DNAJB1P25685 340 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 AK2P54819 239 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 NCBP1Q09161 790 aaKnown RBP22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 GLB1LQ6UWU2 654 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 GJA10Q969M2 543 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 CASD1Q96PB1 797 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 CWH43Q9H720 699 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 ZSWIM4Q9H7M6 989 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 ENTPD7Q9NQZ7 604 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 VAV3Q9UKW4 847 aa22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 FNDC1Q4ZHG4 1894 aaPredicted RBP22.08■■□□□ 1.13
TNFRSF11A-204ENST00000592013 KIAA1671Q9BY89 1806 aa22.08■■□□□ 1.12
TNFRSF11A-204ENST00000592013 C19orf67A6NJJ6 358 aa22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TBX10O75333 385 aa22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ANO5Q75V66 913 aa22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CATSPER4Q7RTX7 472 aa22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 GTF3C6Q969F1 213 aa22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 NLRP4Q96MN2 994 aa22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CCDC43Q96MW1 224 aaKnown RBP22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 PIN4Q9Y237 131 aaKnown RBP22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 COL4A3BPQ9Y5P4 624 aa22.07■■□□□ 1.12
TNFRSF11A-204ENST00000592013 A0A087WZ62 844 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 RBAK-RBAKDNI3L0D1 243 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 STBD1O95210 358 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 IRS1P35568 1242 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 SAFBQ15424 915 aaKnown RBP eCLIP22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CLUL1Q15846 466 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 SRGAP1Q7Z6B7 1085 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 RBM23Q86U06 439 aaKnown RBP22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TMEM87AQ8NBN3 555 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 SMRP1Q8NCR6 262 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 FAM122AQ96E09 287 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 MSLNLQ96KJ4 702 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TCF25Q9BQ70 676 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 FDXACB1Q9BRP7 624 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CD320Q9NPF0 282 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 PCDHA12Q9UN75 941 aa22.06■■□□□ 1.12
TNFRSF11A-204ENST00000592013 HOXB8P17481 243 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 YWHABP31946 246 aaKnown RBP22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 PHKA2P46019 1235 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 NEK4P51957 841 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 GIT2Q14161 759 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 MXD4Q14582 209 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 SMC1AQ14683 1233 aaKnown RBP22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 DUSP6Q16828 381 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 NCAPH2Q6IBW4 605 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TMC7Q7Z402 723 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ZNF598Q86UK7 904 aaKnown RBP22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TMEM169Q96HH4 297 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CEP89Q96ST8 783 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 LXNQ9BS40 222 aa22.05■■□□□ 1.12
TNFRSF11A-204ENST00000592013 FSCN2O14926 492 aa22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ZNF623O75123 536 aa22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 GTF2F1P35269 517 aaKnown RBP eCLIP22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 RNASELQ05823 741 aaKnown RBP22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 DLX2Q07687 328 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TFDP1Q14186 410 aa22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ADGRD2Q7Z7M1 963 aa22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CNNM3Q8NE01 707 aa22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 URGCPQ8TCY9 931 aa22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ZNF668Q96K58 619 aaPredicted RBP22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 DHX33Q9H6R0 707 aaKnown RBP22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 KANSL3Q9P2N6 904 aa22.04■■□□□ 1.12
TNFRSF11A-204ENST00000592013 EML1O00423 815 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 LINC01565O15544 149 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ATF7P17544 494 aaPredicted RBP22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 DRP2Q13474 957 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CALCRLQ16602 461 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 XKR9Q5GH70 373 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 PLA2G4FQ68DD2 849 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TMEM184AQ6ZMB5 413 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 HELQQ8TDG4 1101 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 UBN1Q9NPG3 1134 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 FAM105AQ9NUU6 356 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CLEC1BQ9P126 229 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CNTNAP2Q9UHC6 1331 aa22.03■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TMEM150BA6NC51 233 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 NEMFO60524 1076 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ERLIN2O94905 339 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 PLA2G5P39877 138 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ERVFC1P60507 584 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 ME3Q16798 604 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 TPRNQ4KMQ1 711 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 CLLU1OSQ5K130 101 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 PLPP4Q5VZY2 271 aa22.02■■□□□ 1.12
TNFRSF11A-204ENST00000592013 HACE1Q8IYU2 909 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms