RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PLCB4Q15147 1175 aa18.42■□□□□ 0.54
GCDH-213ENST00000590627 TRIM71Q2Q1W2 868 aaKnown RBP18.42■□□□□ 0.54
GCDH-213ENST00000590627 CKAP2LQ8IYA6 745 aa18.42■□□□□ 0.54
GCDH-213ENST00000590627 C7orf25Q9BPX7 421 aa18.42■□□□□ 0.54
GCDH-213ENST00000590627 ZBED2Q9BTP6 218 aa18.42■□□□□ 0.54
GCDH-213ENST00000590627 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
GCDH-213ENST00000590627 KCND2Q9NZV8 630 aa18.42■□□□□ 0.54
GCDH-213ENST00000590627 WDR81Q562E7 1941 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 TCF20Q9UGU0 1960 aaKnown RBP18.41■□□□□ 0.54
GCDH-213ENST00000590627 ARHGEF35A5YM69 484 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 HBP1O60381 514 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 GJB5O95377 273 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 DEFB103AP81534 67 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 TFF2Q03403 129 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 IKBKEQ14164 716 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 POSTNQ15063 836 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 TARBP2Q15633 366 aaKnown RBP18.41■□□□□ 0.54
GCDH-213ENST00000590627 ZNF618Q5T7W0 954 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
GCDH-213ENST00000590627 TRAF7Q6Q0C0 670 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 RBM43Q6ZSC3 357 aaKnown RBP18.41■□□□□ 0.54
GCDH-213ENST00000590627 CEP89Q96ST8 783 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 RAD9AQ99638 391 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 CYP26B1Q9NR63 512 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 LMCD1Q9NZU5 365 aa18.41■□□□□ 0.54
GCDH-213ENST00000590627 MYMKA6NI61 221 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 LPXNO60711 386 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 CYP11B2P19099 503 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 AFMP43652 599 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 RINT1Q6NUQ1 792 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 C1orf186Q6ZWK4 172 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 GRAMD1CQ8IYS0 662 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 CEP170P1Q96L14 293 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 TRIM9Q9C026 710 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 RNPEPQ9H4A4 650 aa18.4■□□□□ 0.54
GCDH-213ENST00000590627 SEPT9Q9UHD8 586 aaPredicted RBP18.4■□□□□ 0.54
GCDH-213ENST00000590627 MYH9P35579 1960 aaKnown RBP18.4■□□□□ 0.54
GCDH-213ENST00000590627 COL4A4P53420 1690 aaPredicted RBP18.4■□□□□ 0.54
GCDH-213ENST00000590627 LCHNA4D1U4 455 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 TMEM150BA6NC51 233 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 SSBP05455 408 aaKnown RBP eCLIP18.39■□□□□ 0.53
GCDH-213ENST00000590627 COL9A1P20849 921 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 MARK3P27448 753 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 NPEPPSP55786 919 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 ZNF200P98182 395 aaPredicted RBP18.39■□□□□ 0.53
GCDH-213ENST00000590627 DPYDQ12882 1025 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 CAMK4Q16566 473 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 TCTN1Q2MV58 587 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 ARSHQ5FYA8 562 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 XKR9Q5GH70 373 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 ZNF484Q5JVG2 852 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 PLA2G4FQ68DD2 849 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 PADI6Q6TGC4 694 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 SERINC5Q86VE9 423 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 GPBP1Q86WP2 473 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 SPATA20Q8TB22 786 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 STAMQ92783 540 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 WNT8BQ93098 351 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 RUSC1Q9BVN2 902 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 BMP2KQ9NSY1 1161 aaPredicted RBP18.39■□□□□ 0.53
GCDH-213ENST00000590627 COL1A2P08123 1366 aa18.39■□□□□ 0.53
GCDH-213ENST00000590627 ZBTB42B2RXF5 422 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 LETM1O95202 739 aaPredicted RBP18.38■□□□□ 0.53
GCDH-213ENST00000590627 PRR29P0C7W0 189 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 GUCY2CP25092 1073 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 HOXC8P31273 242 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 KCNQ1P51787 676 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 ERVK-21P61565 698 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 PNOCQ13519 176 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 HIC1Q14526 733 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 DHX8Q14562 1220 aaKnown RBP18.38■□□□□ 0.53
GCDH-213ENST00000590627 NT5DC1Q5TFE4 455 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 SPRED2Q7Z698 418 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 TMCO2Q7Z6W1 182 aaPredicted RBP18.38■□□□□ 0.53
GCDH-213ENST00000590627 EXOC8Q8IYI6 725 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 DDX12PQ92771 950 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 HLA-CQ95604 372 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 CCDC43Q96MW1 224 aaKnown RBP18.38■□□□□ 0.53
GCDH-213ENST00000590627 TGS1Q96RS0 853 aaKnown RBP18.38■□□□□ 0.53
GCDH-213ENST00000590627 TIPINQ9BVW5 301 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 TRPC6Q9Y210 931 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 LOXHD1Q8IVV2 1947 aa18.38■□□□□ 0.53
GCDH-213ENST00000590627 C17orf102A2RUQ5 167 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 DGAT1O75907 488 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 RFC5P40937 340 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 SARSP49591 514 aaKnown RBP18.37■□□□□ 0.53
GCDH-213ENST00000590627 CUL4BQ13620 913 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
GCDH-213ENST00000590627 DNAJC19Q96DA6 116 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 NECAB3Q96P71 396 aaPredicted RBP18.37■□□□□ 0.53
GCDH-213ENST00000590627 DHX33Q9H6R0 707 aaKnown RBP18.37■□□□□ 0.53
GCDH-213ENST00000590627 KIAA1468Q9P260 1216 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 TUBE1Q9UJT0 475 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 PCDHA5Q9Y5H7 936 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 SIP14410 1827 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
GCDH-213ENST00000590627 PVALEFA0A1B0GWK0 134 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms