RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 FAM136AQ96C01 138 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 FGFBP2Q9BYJ0 223 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 FAM114A2Q9NRY5 505 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 USP20Q9Y2K6 914 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 SUPT3HO75486 399 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 LONP1P36776 959 aaKnown RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 RPL21P46778 160 aaKnown RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 VPS41P49754 854 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 KLRC3Q07444 240 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 MFSD4BQ5TF39 518 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 INTS5Q6P9B9 1019 aaKnown RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 VSTM1Q6UX27 236 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 ZDHHC24Q6UX98 284 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 RBBP8NLQ8NC74 664 aaPredicted RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 CYTH2Q99418 400 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 ZDHHC18Q9NUE0 388 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 SEPT11Q9NVA2 429 aaKnown RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 CHKBQ9Y259 395 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 SSU72P8A0A1W2PR75 194 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 BRAFP15056 766 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 FOXN2P32314 431 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 TRIP13Q15645 432 aaPredicted RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 CYP4X1Q8N118 509 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 IFT43Q96FT9 208 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 PITPNM3Q9BZ71 974 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 NT5C3AQ9H0P0 336 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 CNNM2Q9H8M5 875 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 LUC7LQ9NQ29 371 aaKnown RBP16.34■□□□□ 0.21
CIRBP-228ENST00000590347 PPP1R9AQ9ULJ8 1098 aa16.34■□□□□ 0.21
CIRBP-228ENST00000590347 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.21
CIRBP-228ENST00000590347 CCDC194A0A1B0GVG4 234 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 OR6B1O95007 311 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 SLC9A1P19634 815 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 SGSM1Q2NKQ1 1148 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 ALKBH5Q6P6C2 394 aaKnown RBP16.33■□□□□ 0.21
CIRBP-228ENST00000590347 JAMLQ86YT9 394 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.33■□□□□ 0.214e-6■■□□□ 12.7
CIRBP-228ENST00000590347 TPCN2Q8NHX9 752 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 ACTRT1Q8TDG2 376 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 PGM2Q96G03 612 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 TUBGCP5Q96RT8 1024 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 ERP44Q9BS26 406 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 ZHX3Q9H4I2 956 aa16.33■□□□□ 0.21
CIRBP-228ENST00000590347 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 ABCC12Q96J65 1359 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 PFASO15067 1338 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 TJP3O95049 919 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 CSF1RP07333 972 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 SETSIPP0DME0 302 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 ACADSP16219 412 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 EPS15P42566 896 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 RTP1P59025 263 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 MPP3Q13368 585 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 KPNB1Q14974 876 aaKnown RBP16.33■□□□□ 0.2
CIRBP-228ENST00000590347 CCDC87Q9NVE4 849 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 MYH4Q9Y623 1939 aa16.33■□□□□ 0.2
CIRBP-228ENST00000590347 PRPF3O43395 683 aaKnown RBP16.32■□□□□ 0.2
CIRBP-228ENST00000590347 MAGEA8P43361 318 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 TMED1Q13445 227 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 DCAF12L1Q5VU92 463 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 GJB6O95452 261 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 AGTP01019 485 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 C6orf118Q5T5N4 469 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 GBP7Q8N8V2 638 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-228ENST00000590347 LRRC57Q8N9N7 239 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 ESR2Q92731 530 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 MKNK1Q9BUB5 465 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 ARMCX3Q9UH62 379 aaPredicted RBP16.32■□□□□ 0.2
CIRBP-228ENST00000590347 PHF24Q9UPV7 400 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 MYMKA6NI61 221 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
CIRBP-228ENST00000590347 DYNC1I2Q13409 638 aaKnown RBP16.32■□□□□ 0.2
CIRBP-228ENST00000590347 CFAP157Q5JU67 520 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 IRGCQ6NXR0 463 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 CAPN12Q6ZSI9 719 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 RBM12BQ8IXT5 1001 aaKnown RBP16.32■□□□□ 0.2
CIRBP-228ENST00000590347 TXLNGYQ9BZA5 131 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 DCTN4Q9UJW0 460 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 BCS1LQ9Y276 419 aa16.32■□□□□ 0.2
CIRBP-228ENST00000590347 STK10O94804 968 aaKnown RBP16.31■□□□□ 0.2
CIRBP-228ENST00000590347 SCG2P13521 617 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 MARCKSL1P49006 195 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 SETDB1Q15047 1291 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 UBE3CQ15386 1083 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 PABPC1LQ4VXU2 614 aaKnown RBP16.31■□□□□ 0.2
CIRBP-228ENST00000590347 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 HP1BP3Q5SSJ5 553 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-228ENST00000590347 SLC7A6OSQ96CW6 309 aaPredicted RBP16.31■□□□□ 0.2
CIRBP-228ENST00000590347 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.31■□□□□ 0.2
CIRBP-228ENST00000590347 CLIC5Q9NZA1 410 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 ROBO1Q9Y6N7 1651 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 WDR91A4D1P6 747 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 MAGEA13PA6NCF6 341 aa16.31■□□□□ 0.2
CIRBP-228ENST00000590347 TBX10O75333 385 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 422.1 ms