RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 NFKBIZQ9BYH8 718 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 GPRC5CQ9NQ84 441 aa20.8■□□□□ 0.92
MBD1-223ENST00000590215 KCNJ6P48051 423 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 PTENP60484 403 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 CAPSQ13938 189 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 TFDP1Q14186 410 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 FAM102BQ5T8I3 360 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 FAM109BQ6ICB4 259 aaPredicted RBP20.79■□□□□ 0.92
MBD1-223ENST00000590215 SHC4Q6S5L8 630 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 SRGAP1Q7Z6B7 1085 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 RTN4RL1Q86UN2 441 aaPredicted RBP20.79■□□□□ 0.92
MBD1-223ENST00000590215 RNF149Q8NC42 400 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 LINC01599Q8WXQ3 324 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 RAD54LQ92698 747 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 KIFAP3Q92845 792 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 SCAND2PQ9GZW5 306 aaPredicted RBP20.79■□□□□ 0.92
MBD1-223ENST00000590215 TSPYL2Q9H2G4 693 aaPredicted RBP20.79■□□□□ 0.92
MBD1-223ENST00000590215 STK17AQ9UEE5 414 aa20.79■□□□□ 0.92
MBD1-223ENST00000590215 ENPP3O14638 875 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 SRGAP2CP0DJJ0 459 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 ATP2A2P16615 1042 aaKnown RBP20.78■□□□□ 0.92
MBD1-223ENST00000590215 ME1P48163 572 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 DEFB103AP81534 67 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 NFX1Q12986 1120 aaKnown RBP20.78■□□□□ 0.92
MBD1-223ENST00000590215 DSC3Q14574 896 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 NAALADL2Q58DX5 795 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.78■□□□□ 0.92
MBD1-223ENST00000590215 MAEAQ7L5Y9 396 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 DAW1Q8N136 415 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 RASSF8Q8NHQ8 419 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 LARP4BQ92615 738 aaKnown RBP20.78■□□□□ 0.92
MBD1-223ENST00000590215 SPATA32Q96LK8 384 aa20.78■□□□□ 0.92
MBD1-223ENST00000590215 RBM19Q9Y4C8 960 aaKnown RBP20.78■□□□□ 0.92
MBD1-223ENST00000590215 A0A087X0B3 334 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 SOX1O00570 391 aaPredicted RBP20.77■□□□□ 0.92
MBD1-223ENST00000590215 CSDE1O75534 798 aaKnown RBP20.77■□□□□ 0.92
MBD1-223ENST00000590215 SFPQP23246 707 aaKnown RBP eCLIP20.77■□□□□ 0.92
MBD1-223ENST00000590215 PHKA2P46019 1235 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 MAPK7Q13164 816 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 PCBP1Q15365 356 aaKnown RBP eCLIP20.77■□□□□ 0.92
MBD1-223ENST00000590215 ARSHQ5FYA8 562 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 RRAGBQ5VZM2 374 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 CCDC73Q6ZRK6 1079 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 MINDY3Q9H8M7 445 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 TSHZ2Q9NRE2 1034 aa20.77■□□□□ 0.92
MBD1-223ENST00000590215 TTC3P53804 2025 aa20.77■□□□□ 0.91
MBD1-223ENST00000590215 TCHHQ07283 1943 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 GRXCR1A8MXD5 290 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 MGEA5O60502 916 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 AMHP03971 560 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 NCLP19338 710 aaKnown RBP20.76■□□□□ 0.91
MBD1-223ENST00000590215 MCM6Q14566 821 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 RESP18Q5W5W9 173 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 CDCA2Q69YH5 1023 aaPredicted RBP20.76■□□□□ 0.91
MBD1-223ENST00000590215 ADALQ6DHV7 355 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 HERC6Q8IVU3 1022 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 CRIPAKQ8N1N5 446 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 BSNDQ8WZ55 320 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 TOP1MTQ969P6 601 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 C17orf75Q9HAS0 396 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 CHST12Q9NRB3 414 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 RGS18Q9NS28 235 aa20.76■□□□□ 0.91
MBD1-223ENST00000590215 HIP1RO75146 1068 aa20.75■□□□□ 0.91
MBD1-223ENST00000590215 SSBP05455 408 aaKnown RBP eCLIP20.75■□□□□ 0.91
MBD1-223ENST00000590215 FGFR4P22455 802 aa20.75■□□□□ 0.91
MBD1-223ENST00000590215 NAMPTP43490 491 aa20.75■□□□□ 0.91
MBD1-223ENST00000590215 FXR1P51114 621 aaKnown RBP eCLIP20.75■□□□□ 0.91
MBD1-223ENST00000590215 PPP2R5AQ15172 486 aa20.75■□□□□ 0.91
MBD1-223ENST00000590215 E2F4Q16254 413 aa20.75■□□□□ 0.91
MBD1-223ENST00000590215 DRC1Q96MC2 740 aa20.75■□□□□ 0.91
MBD1-223ENST00000590215 GJB5O95377 273 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 FAM189BP81408 668 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 MBTD1Q05BQ5 628 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 GPR153Q6NV75 609 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 GPBP1Q86WP2 473 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 MYOCDQ8IZQ8 938 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 IFT74Q96LB3 600 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 ADAM2Q99965 735 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 TRAIPQ9BWF2 469 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 PBX4Q9BYU1 374 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 POLD4Q9HCU8 107 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 C1orf112Q9NSG2 853 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 CHMP5Q9NZZ3 219 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 ODF2LQ9ULJ1 636 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 PCDHA11Q9Y5I1 949 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 PTPRSQ13332 1948 aa20.74■□□□□ 0.91
MBD1-223ENST00000590215 C9IYK1 514 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 CMA1P23946 247 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 STAT6P42226 847 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 AMHR2Q16671 573 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 SLC24A5Q71RS6 500 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 CATSPER4Q7RTX7 472 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 LRCH3Q96II8 777 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 NTPCRQ9BSD7 190 aaKnown RBP20.73■□□□□ 0.91
MBD1-223ENST00000590215 PANK2Q9BZ23 570 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 C2orf40Q9H1Z8 148 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 CUEDC2Q9H467 287 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 AGPAT5Q9NUQ2 364 aa20.73■□□□□ 0.91
MBD1-223ENST00000590215 FAM237AA0A1B0GTK4 181 aa20.72■□□□□ 0.91
MBD1-223ENST00000590215 DENND3A2RUS2 1198 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms