RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 ECHDC2Q86YB7 292 aa20.09■□□□□ 0.81
CIRBP-227ENST00000590188 EXOC8Q8IYI6 725 aa20.09■□□□□ 0.81
CIRBP-227ENST00000590188 C4orf32Q8N8J7 132 aa20.09■□□□□ 0.81
CIRBP-227ENST00000590188 TCP11Q8WWU5 503 aa20.09■□□□□ 0.81
CIRBP-227ENST00000590188 MRPL38Q96DV4 380 aaKnown RBP20.09■□□□□ 0.81
CIRBP-227ENST00000590188 C11orf84Q9BUA3 381 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-227ENST00000590188 IFT122Q9HBG6 1241 aa20.09■□□□□ 0.81
CIRBP-227ENST00000590188 ALG13Q9NP73 1137 aaKnown RBP20.09■□□□□ 0.81
CIRBP-227ENST00000590188 ANKEF1Q9NU02 776 aa20.09■□□□□ 0.81
CIRBP-227ENST00000590188 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-227ENST00000590188 KIAA1671Q9BY89 1806 aa20.09■□□□□ 0.81
CIRBP-227ENST00000590188 RARRES1P49788 294 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 FAM189BP81408 668 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 PTGDRQ13258 359 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 TWF2Q6IBS0 349 aaKnown RBP20.08■□□□□ 0.81
CIRBP-227ENST00000590188 FERMT3Q86UX7 667 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 RNF149Q8NC42 400 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 IL27Q8NEV9 243 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 ERMNQ8TAM6 284 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 INO80BQ9C086 356 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-227ENST00000590188 MINDY3Q9H8M7 445 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 TUFT1Q9NNX1 390 aa20.08■□□□□ 0.81
CIRBP-227ENST00000590188 C5orf67F2Z3F1 127 aa20.07■□□□□ 0.8
CIRBP-227ENST00000590188 RB1P06400 928 aa20.07■□□□□ 0.8
CIRBP-227ENST00000590188 TJAP1Q5JTD0 557 aa20.07■□□□□ 0.8
CIRBP-227ENST00000590188 ASAP3Q8TDY4 903 aa20.07■□□□□ 0.8
CIRBP-227ENST00000590188 ELAC1Q9H777 363 aaKnown RBP20.07■□□□□ 0.8
CIRBP-227ENST00000590188 RNF19AQ9NV58 838 aa20.07■□□□□ 0.8
CIRBP-227ENST00000590188 TYW1Q9NV66 732 aaKnown RBP20.07■□□□□ 0.8
CIRBP-227ENST00000590188 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-227ENST00000590188 GAS2O43903 313 aaKnown RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 DGAT1O75907 488 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 CCT6AP40227 531 aaKnown RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 MRPS5P82675 430 aaKnown RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 FNDC1Q4ZHG4 1894 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 TCEAL5Q5H9L2 206 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 LARP1BQ659C4 914 aaKnown RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 ABI1Q8IZP0 508 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 KLHL23Q8NBE8 558 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 HELQQ8TDG4 1101 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 ATXN2LQ8WWM7 1075 aaKnown RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 LPPQ93052 612 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 ASB2Q96Q27 587 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 POLR3CQ9BUI4 534 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 POLR3FQ9H1D9 316 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-227ENST00000590188 GPRC5CQ9NQ84 441 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 LRWD1Q9UFC0 647 aa20.06■□□□□ 0.8
CIRBP-227ENST00000590188 PP2D1A8MPX8 630 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 ITGB1P05556 798 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 ATF7P17544 494 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-227ENST00000590188 FXR2P51116 673 aaKnown RBP eCLIP20.05■□□□□ 0.8
CIRBP-227ENST00000590188 KCNQ1P51787 676 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 ECM1Q16610 540 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 TIGD5Q53EQ6 642 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 CLLU1OSQ5K130 101 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 FAM43BQ6ZT52 329 aaPredicted RBP20.05■□□□□ 0.8
CIRBP-227ENST00000590188 EP400NLQ6ZTU2 488 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 SRGAP1Q7Z6B7 1085 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 HLA-CQ95604 372 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 CASD1Q96PB1 797 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 TMEM117Q9H0C3 514 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.05■□□□□ 0.8
CIRBP-227ENST00000590188 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 REV3LO60673 3130 aa20.05■□□□□ 0.8
CIRBP-227ENST00000590188 TRANK1O15050 2925 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 A0A0U1RQF3 1178 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 ASAP2O43150 1006 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 RPA1P27694 616 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 PHKA2P46019 1235 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 CAPSQ13938 189 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 HAUS3Q68CZ6 603 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 ZNF598Q86UK7 904 aaKnown RBP20.04■□□□□ 0.8
CIRBP-227ENST00000590188 SNX29Q8TEQ0 813 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 NACC1Q96RE7 527 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 PLVAPQ9BX97 442 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 NSUN3Q9H649 340 aaKnown RBP20.04■□□□□ 0.8
CIRBP-227ENST00000590188 CWH43Q9H720 699 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 CHST12Q9NRB3 414 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 PLAGL2Q9UPG8 496 aa20.04■□□□□ 0.8
CIRBP-227ENST00000590188 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-227ENST00000590188 ARHGEF35A5YM69 484 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 INO80B-WBP1J3KQ70 363 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 HOXA2O43364 376 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.8
CIRBP-227ENST00000590188 GLRA2P23416 452 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 DNAJB1P25685 340 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 CDC25AP30304 524 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 ARL2P36404 184 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 PBX3P40426 434 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 TFDP1Q14186 410 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 MXD4Q14582 209 aaPredicted RBP20.03■□□□□ 0.8
CIRBP-227ENST00000590188 IL17AQ16552 155 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 RILPL1Q5EBL4 403 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 LRRC55Q6ZSA7 311 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 THNSL1Q8IYQ7 743 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 COLGALT1Q8NBJ5 622 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 POF1BQ8WVV4 589 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 POLD4Q9HCU8 107 aa20.03■□□□□ 0.8
CIRBP-227ENST00000590188 AGPAT5Q9NUQ2 364 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms