RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 MYOCDQ8IZQ8 938 aa23.62■■□□□ 1.37
ATG4D-212ENST00000590096 KIFAP3Q92845 792 aa23.62■■□□□ 1.37
ATG4D-212ENST00000590096 CIZ1Q9ULV3 898 aaPredicted RBP23.62■■□□□ 1.37
ATG4D-212ENST00000590096 DEFB103AP81534 67 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 CAPSQ13938 189 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 RRAGBQ5VZM2 374 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 FAM109BQ6ICB4 259 aaPredicted RBP23.61■■□□□ 1.37
ATG4D-212ENST00000590096 RINT1Q6NUQ1 792 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.61■■□□□ 1.37
ATG4D-212ENST00000590096 CCDC73Q6ZRK6 1079 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 SRGAP1Q7Z6B7 1085 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 LARP4BQ92615 738 aaKnown RBP23.61■■□□□ 1.37
ATG4D-212ENST00000590096 RAD54LQ92698 747 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 RUSC1Q9BVN2 902 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 TIPINQ9BVW5 301 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 SCAND2PQ9GZW5 306 aaPredicted RBP23.61■■□□□ 1.37
ATG4D-212ENST00000590096 IFT122Q9HBG6 1241 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 KCND2Q9NZV8 630 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 PCDHA7Q9UN72 937 aa23.61■■□□□ 1.37
ATG4D-212ENST00000590096 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.6■■□□□ 1.37
ATG4D-212ENST00000590096 DENND3A2RUS2 1198 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 GRXCR1A8MXD5 290 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 CSDE1O75534 798 aaKnown RBP23.6■■□□□ 1.37
ATG4D-212ENST00000590096 SLC12A3P55017 1021 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 DHX8Q14562 1220 aaKnown RBP23.6■■□□□ 1.37
ATG4D-212ENST00000590096 PPP2R5AQ15172 486 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 C1orf186Q6ZWK4 172 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 LEO1Q8WVC0 666 aaPredicted RBP23.6■■□□□ 1.37
ATG4D-212ENST00000590096 IFT74Q96LB3 600 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 BLOC1S4Q9NUP1 217 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 STK17AQ9UEE5 414 aa23.6■■□□□ 1.37
ATG4D-212ENST00000590096 TCHHQ07283 1943 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 LRRIQ4A6NIV6 560 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 SOX1O00570 391 aaPredicted RBP23.59■■□□□ 1.37
ATG4D-212ENST00000590096 ENPP3O14638 875 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 ZSCAN20P17040 1043 aaPredicted RBP23.59■■□□□ 1.37
ATG4D-212ENST00000590096 FGFR4P22455 802 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 PTENP60484 403 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 POU5F1BQ06416 359 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 AXDND1Q5T1B0 1012 aaPredicted RBP23.59■■□□□ 1.37
ATG4D-212ENST00000590096 CATSPER4Q7RTX7 472 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 HERC6Q8IVU3 1022 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 CHAMP1Q96JM3 812 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 DRC1Q96MC2 740 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 ZBED2Q9BTP6 218 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 TSPYL2Q9H2G4 693 aaPredicted RBP23.59■■□□□ 1.37
ATG4D-212ENST00000590096 TMX1Q9H3N1 280 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 PTPRSQ13332 1948 aa23.59■■□□□ 1.37
ATG4D-212ENST00000590096 HIP1RO75146 1068 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 GUCY2CP25092 1073 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 STAT6P42226 847 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 MCM6Q14566 821 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 RAB30Q15771 203 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 GPBP1Q86WP2 473 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 LRRC15Q8TF66 581 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 ADAM2Q99965 735 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 NFKBIZQ9BYH8 718 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 PANK2Q9BZ23 570 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 POLD4Q9HCU8 107 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 FAM13BQ9NYF5 915 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 MSRAQ9UJ68 235 aa23.58■■□□□ 1.37
ATG4D-212ENST00000590096 NAMPTP43490 491 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 RAD51AP2Q09MP3 1159 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 FAM117BQ6P1L5 589 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 SHC4Q6S5L8 630 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 IFNLR1Q8IU57 520 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-212ENST00000590096 ZBTB8OSQ8IWT0 167 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 PDILTQ8N807 584 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 LINC01599Q8WXQ3 324 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 LRCH3Q96II8 777 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 MINDY3Q9H8M7 445 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 C1orf112Q9NSG2 853 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 A0A0C4DFX4 3053 aa23.57■■□□□ 1.36
ATG4D-212ENST00000590096 COL6A3P12111 3177 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 INO80B-WBP1J3KQ70 363 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 MGEA5O60502 916 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 ERLIN2O94905 339 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 UPP2O95045 317 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 KRT18P05783 430 aaKnown RBP23.56■■□□□ 1.36
ATG4D-212ENST00000590096 RABGGTBP53611 331 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 PCBP1Q15365 356 aaKnown RBP eCLIP23.56■■□□□ 1.36
ATG4D-212ENST00000590096 TMCO2Q7Z6W1 182 aaPredicted RBP23.56■■□□□ 1.36
ATG4D-212ENST00000590096 RTN4RL1Q86UN2 441 aaPredicted RBP23.56■■□□□ 1.36
ATG4D-212ENST00000590096 DEPTORQ8TB45 409 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 BSNDQ8WZ55 320 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 TOP1MTQ969P6 601 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 PBX4Q9BYU1 374 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 C2orf40Q9H1Z8 148 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 CHST12Q9NRB3 414 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 RGS18Q9NS28 235 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 RNF216Q9NWF9 866 aaPredicted RBP23.56■■□□□ 1.36
ATG4D-212ENST00000590096 DACT1Q9NYF0 836 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 PIN4Q9Y237 131 aaKnown RBP23.56■■□□□ 1.36
ATG4D-212ENST00000590096 RBM19Q9Y4C8 960 aaKnown RBP23.56■■□□□ 1.36
ATG4D-212ENST00000590096 PCDHA11Q9Y5I1 949 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 GBF1Q92538 1859 aa23.56■■□□□ 1.36
ATG4D-212ENST00000590096 TLL1O43897 1013 aa23.55■■□□□ 1.36
ATG4D-212ENST00000590096 GJB5O95377 273 aa23.55■■□□□ 1.36
ATG4D-212ENST00000590096 IBSPP21815 317 aaPredicted RBP23.55■■□□□ 1.36
ATG4D-212ENST00000590096 DNAJB2P25686 324 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms