RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 ORC3Q9UBD5 711 aaPredicted RBP20.23■□□□□ 0.83
H3F3B-209ENST00000589949 FAM50BQ9Y247 325 aa20.23■□□□□ 0.83
H3F3B-209ENST00000589949 CDKL5O76039 1030 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 NEFLP07196 543 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 LAG3P18627 525 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 SPIRE1Q08AE8 756 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 ME3Q16798 604 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 KCNT2Q6UVM3 1135 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 HELQQ8TDG4 1101 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 FAM20AQ96MK3 541 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 GCOM2Q9BZD3 368 aaPredicted RBP20.22■□□□□ 0.83
H3F3B-209ENST00000589949 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
H3F3B-209ENST00000589949 MEIS3P2A8K0S8 358 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 WNT7AO00755 349 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 ZBTB39O15060 712 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
H3F3B-209ENST00000589949 ANAPC15P60006 121 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 PLCB3Q01970 1234 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 COASYQ13057 564 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 KCNC3Q14003 757 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 DUSP6Q16828 381 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 RHPN2Q8IUC4 686 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 MRPS27Q92552 414 aaKnown RBP20.21■□□□□ 0.83
H3F3B-209ENST00000589949 PPP2R3CQ969Q6 453 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 CYP26B1Q9NR63 512 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 RGL1Q9NZL6 768 aa20.21■□□□□ 0.83
H3F3B-209ENST00000589949 HIDE1A8MVS5 230 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 DCXO43602 365 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 QARSP47897 775 aaKnown RBP20.2■□□□□ 0.82
H3F3B-209ENST00000589949 ST3GAL1Q11201 340 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 LONRF3Q496Y0 759 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 PLPP4Q5VZY2 271 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 LRRC43Q8N309 656 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 LPPQ93052 612 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 IFT122Q9HBG6 1241 aa20.2■□□□□ 0.82
H3F3B-209ENST00000589949 USP15Q9Y4E8 981 aaPredicted RBP20.2■□□□□ 0.82
H3F3B-209ENST00000589949 HOXA2O43364 376 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 SEC24BO95487 1268 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 EOMESO95936 686 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 ALADP13716 330 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 GCFC2P16383 781 aaKnown RBP20.19■□□□□ 0.82
H3F3B-209ENST00000589949 PLA2G5P39877 138 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 PHKA2P46019 1235 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 DNM2P50570 870 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 CSPP1Q1MSJ5 1256 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 ABI1Q8IZP0 508 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 SLC39A11Q8N1S5 342 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 NLRP4Q96MN2 994 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 ZNF558Q96NG5 402 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 DHX33Q9H6R0 707 aaKnown RBP20.19■□□□□ 0.82
H3F3B-209ENST00000589949 MINDY3Q9H8M7 445 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 BMP2KQ9NSY1 1161 aaPredicted RBP20.19■□□□□ 0.82
H3F3B-209ENST00000589949 MUTYHQ9UIF7 546 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 LZTS1Q9Y250 596 aa20.19■□□□□ 0.82
H3F3B-209ENST00000589949 PRR33A8MZF0 331 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 NT5C1B-RDH14C9J2C7 533 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 TBX3O15119 743 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 JAK2O60674 1132 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 P4HBP07237 508 aaKnown RBP20.18■□□□□ 0.82
H3F3B-209ENST00000589949 ZNF410Q86VK4 478 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 TMEM173Q86WV6 379 aaPredicted RBP20.18■□□□□ 0.82
H3F3B-209ENST00000589949 RNF135Q8IUD6 432 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 NSUN7Q8NE18 718 aaKnown RBP20.18■□□□□ 0.82
H3F3B-209ENST00000589949 GTF3C6Q969F1 213 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 TMEM143Q96AN5 459 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 DYDC2Q96IM9 177 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 TCF25Q9BQ70 676 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 TRAIPQ9BWF2 469 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 CHST12Q9NRB3 414 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 DACT1Q9NYF0 836 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 SPG21Q9NZD8 308 aa20.18■□□□□ 0.82
H3F3B-209ENST00000589949 B4GALT3O60512 393 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 FOSBP53539 338 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 CDC42EP1Q00587 391 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 CTTNQ14247 550 aaKnown RBP20.17■□□□□ 0.82
H3F3B-209ENST00000589949 EPHA7Q15375 998 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 NCAPH2Q6IBW4 605 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 PDE12Q6L8Q7 609 aaKnown RBP20.17■□□□□ 0.82
H3F3B-209ENST00000589949 C4orf19Q8IY42 314 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 PRPF31Q8WWY3 499 aaKnown RBP20.17■□□□□ 0.82
H3F3B-209ENST00000589949 CEP170P1Q96L14 293 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 LXNQ9BS40 222 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 PIN4Q9Y237 131 aaKnown RBP20.17■□□□□ 0.82
H3F3B-209ENST00000589949 COL4A3BPQ9Y5P4 624 aa20.17■□□□□ 0.82
H3F3B-209ENST00000589949 XBP1P17861 261 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 SFPQP23246 707 aaKnown RBP eCLIP20.16■□□□□ 0.82
H3F3B-209ENST00000589949 AFF1P51825 1210 aaKnown RBP20.16■□□□□ 0.82
H3F3B-209ENST00000589949 BCAR1P56945 870 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 CYP4A11Q02928 519 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 TWF2Q6IBS0 349 aaKnown RBP20.16■□□□□ 0.82
H3F3B-209ENST00000589949 SYCE2Q6PIF2 218 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 TMEM184AQ6ZMB5 413 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 BCL7CQ8WUZ0 217 aaPredicted RBP20.16■□□□□ 0.82
H3F3B-209ENST00000589949 SUSD6Q92537 303 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 S1PR5Q9H228 398 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 ENTPD7Q9NQZ7 604 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 FAM105AQ9NUU6 356 aa20.16■□□□□ 0.82
H3F3B-209ENST00000589949 CDH22Q9UJ99 828 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms