RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GINS2Q9Y248 185 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 F5P12259 2224 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 EML5Q05BV3 1969 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 CCDC195A0A1B0GUA6 201 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 TMEM8BA6NDV4 472 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 RRN3P2A6NIE6 340 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 B4GALT3O60512 393 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 LILRB3O75022 631 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 RFPL2O75678 378 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 STAM2O75886 525 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 KCNK5O95279 499 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 MAGEA9P43362 315 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 RPS9P46781 194 aaKnown RBP7.01□□□□□ -1.29
VPS25-204ENST00000589577 POLGP54098 1239 aaPredicted RBP7.01□□□□□ -1.29
VPS25-204ENST00000589577 SRSF5Q13243 272 aaKnown RBP7.01□□□□□ -1.29
VPS25-204ENST00000589577 SF3A2Q15428 464 aaKnown RBP7.01□□□□□ -1.29
VPS25-204ENST00000589577 IL31Q6EBC2 164 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 MTHFD1LQ6UB35 978 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 PARM1Q6UWI2 310 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 DDX53Q86TM3 631 aaKnown RBP7.01□□□□□ -1.29
VPS25-204ENST00000589577 ZNF598Q86UK7 904 aaKnown RBP7.01□□□□□ -1.29
VPS25-204ENST00000589577 PPFIBP1Q86W92 1011 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 ECHDC2Q86YB7 292 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 TBC1D10CQ8IV04 446 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 ZNF687Q8N1G0 1237 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 CELF5Q8N6W0 485 aaKnown RBP7.01□□□□□ -1.29
VPS25-204ENST00000589577 PNMA1Q8ND90 353 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 HELQQ8TDG4 1101 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 TMEM169Q96HH4 297 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 IGSF21Q96ID5 467 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 ZKSCAN3Q9BRR0 538 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 MYL10Q9BUA6 226 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 RHOBTB2Q9BYZ6 727 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 ADAM33Q9BZ11 813 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 MAN1C1Q9NR34 630 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 NEDD4P46934 1319 aa7.01□□□□□ -1.29
VPS25-204ENST00000589577 SPDYE4A6NLX3 237 aa7□□□□□ -1.29
VPS25-204ENST00000589577 GIPC1O14908 333 aa7□□□□□ -1.29
VPS25-204ENST00000589577 INPPL1O15357 1258 aa7□□□□□ -1.29
VPS25-204ENST00000589577 HOXA2O43364 376 aa7□□□□□ -1.29
VPS25-204ENST00000589577 HRO43593 1189 aa7□□□□□ -1.29
VPS25-204ENST00000589577 DHX16O60231 1041 aaKnown RBP7□□□□□ -1.29
VPS25-204ENST00000589577 MYBP10242 640 aa7□□□□□ -1.29
VPS25-204ENST00000589577 ALDH7A1P49419 539 aaKnown RBP7□□□□□ -1.29
VPS25-204ENST00000589577 PRKCQQ04759 706 aa7□□□□□ -1.29
VPS25-204ENST00000589577 GIT2Q14161 759 aa7□□□□□ -1.29
VPS25-204ENST00000589577 KIZQ2M2Z5 673 aa7□□□□□ -1.29
VPS25-204ENST00000589577 SLC44A4Q53GD3 710 aa7□□□□□ -1.29
VPS25-204ENST00000589577 ASPRV1Q53RT3 343 aa7□□□□□ -1.29
VPS25-204ENST00000589577 ZBTB41Q5SVQ8 909 aa7□□□□□ -1.29
VPS25-204ENST00000589577 PSAPL1Q6NUJ1 521 aa7□□□□□ -1.29
VPS25-204ENST00000589577 PRR23BQ6ZRT6 265 aa7□□□□□ -1.29
VPS25-204ENST00000589577 FAM43BQ6ZT52 329 aaPredicted RBP7□□□□□ -1.29
VPS25-204ENST00000589577 GET4Q7L5D6 327 aaPredicted RBP7□□□□□ -1.29
VPS25-204ENST00000589577 KIAA0319LQ8IZA0 1049 aa7□□□□□ -1.29
VPS25-204ENST00000589577 ABI1Q8IZP0 508 aa7□□□□□ -1.29
VPS25-204ENST00000589577 STAG2Q8N3U4 1231 aa7□□□□□ -1.29
VPS25-204ENST00000589577 NME8Q8N427 588 aa7□□□□□ -1.29
VPS25-204ENST00000589577 SAMD3Q8N6K7 520 aa7□□□□□ -1.29
VPS25-204ENST00000589577 SEPT1Q8WYJ6 367 aa7□□□□□ -1.29
VPS25-204ENST00000589577 ZCCHC14Q8WYQ9 949 aaKnown RBP7□□□□□ -1.29
VPS25-204ENST00000589577 STAMQ92783 540 aa7□□□□□ -1.29
VPS25-204ENST00000589577 BBC3Q96PG8 261 aaPredicted RBP7□□□□□ -1.29
VPS25-204ENST00000589577 PPP1R16BQ96T49 567 aa7□□□□□ -1.29
VPS25-204ENST00000589577 OSMRQ99650 979 aa7□□□□□ -1.29
VPS25-204ENST00000589577 LSM14BQ9BX40 385 aaKnown RBP7□□□□□ -1.29
VPS25-204ENST00000589577 SMARCAD1Q9H4L7 1026 aa7□□□□□ -1.29
VPS25-204ENST00000589577 RAB23Q9ULC3 237 aa7□□□□□ -1.29
VPS25-204ENST00000589577 GTF3C3Q9Y5Q9 886 aa7□□□□□ -1.29
VPS25-204ENST00000589577 HECTD1Q9ULT8 2610 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 PDCD11Q14690 1871 aaKnown RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 ZBTB42B2RXF5 422 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 GCOM1H8Y6P7 765 aaPredicted RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 ZBTB5O15062 677 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 GPR182O15218 404 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 ZC3H11AO75152 810 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS25-204ENST00000589577 GPR32O75388 356 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 FGAP02671 866 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 SSBP05455 408 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS25-204ENST00000589577 POLR2MP0CAP2 368 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 ITGB5P18084 799 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 KLRC2P26717 231 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 RBM25P49756 843 aaKnown RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 FOXC1Q12948 553 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 HDAC1Q13547 482 aaPredicted RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 ALX1Q15699 326 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 STPG1Q5TH74 334 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 PCNX4Q63HM2 1172 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 RSPO2Q6UXX9 243 aaPredicted RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 CYP26C1Q6V0L0 522 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 CENPQQ7L2Z9 268 aaPredicted RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 DGKHQ86XP1 1220 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 TMEM87AQ8NBN3 555 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 RNF169Q8NCN4 708 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 SMG7Q92540 1137 aaKnown RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 LRRCC1Q9C099 1032 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 FAM217BQ9NTX9 383 aaPredicted RBP6.99□□□□□ -1.29
VPS25-204ENST00000589577 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS25-204ENST00000589577 DNAJB4Q9UDY4 337 aa6.99□□□□□ -1.29
VPS25-204ENST00000589577 GALTP07902 379 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms