RNA–Protein interactions for RNA: ENST00000589222.5

BCAS3-222, Transcript of BCAS3, microtubule associated cell migration factor, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-222	ENST00000589222	CCDC172	P0C7W6	258 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	SNHG28	P0DPA3	235 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	FER	P16591	822 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	IFT88	Q13099	833 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	OTOP1	Q7RTM1	612 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	ANKRD42	Q8N9B4	389 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	THOC1	Q96FV9	657 aa	Known RBP	13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	KCTD10	Q9H3F6	313 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	KMT5A	Q9NQR1	393 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	FBXL5	Q9UKA1	691 aa		13.23	□□□□□ -0.29
BCAS3-222	ENST00000589222	PDE4DIP	Q5VU43	2346 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	SYF2	O95926	243 aa	Known RBP	13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	RNF207	Q6ZRF8	634 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	ETNPPL	Q8TBG4	499 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	SSU72P8	A0A1W2PR75	194 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	DDX3X	O00571	662 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	IFNB1	P01574	187 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	VIM	P08670	466 aa	Known RBP	13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	IGBP1	P78318	339 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	LRRC31	Q6UY01	552 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	C1orf54	Q8WWF1	131 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	TMEM143	Q96AN5	459 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	ATG4C	Q96DT6	458 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	VCPKMT	Q9H867	229 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	GGT7	Q9UJ14	662 aa		13.22	□□□□□ -0.29
BCAS3-222	ENST00000589222	SPDYE2B	A6NHP3	402 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	EGFR	P00533	1210 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	MYCN	P04198	464 aa	Predicted RBP	13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	ASNS	P08243	561 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	SPDYE6	P0CI01	402 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	VAMP7	P51809	220 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	MUM1L1	Q5H9M0	696 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	FRMD5	Q7Z6J6	570 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	ARHGEF26	Q96DR7	871 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	WRNIP1	Q96S55	665 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	PPP1R9A	Q9ULJ8	1098 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	KRT19	P08727	400 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	SOX5	P35711	763 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	SEL1L2	Q5TEA6	688 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	SNRNP48	Q6IEG0	339 aa	Known RBP	13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	LLGL2	Q6P1M3	1020 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	SCARA5	Q6ZMJ2	495 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	CPNE8	Q86YQ8	564 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	ANKRD35	Q8N283	1001 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	ZNF408	Q9H9D4	720 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	TSKS	Q9UJT2	592 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	SERPINA10	Q9UK55	444 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	SUGT1	Q9Y2Z0	365 aa		13.21	□□□□□ -0.29
BCAS3-222	ENST00000589222	ACSL3	O95573	720 aa		13.21	□□□□□ -0.3
BCAS3-222	ENST00000589222	GAP43	P17677	238 aa		13.21	□□□□□ -0.3
BCAS3-222	ENST00000589222	YWHAB	P31946	246 aa	Known RBP	13.21	□□□□□ -0.3
BCAS3-222	ENST00000589222	MKRN3	Q13064	507 aa	Known RBP	13.21	□□□□□ -0.3
BCAS3-222	ENST00000589222	MDM1	Q8TC05	714 aa		13.21	□□□□□ -0.3
BCAS3-222	ENST00000589222	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.21	□□□□□ -0.3
BCAS3-222	ENST00000589222	ATP9A	O75110	1047 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	SRGAP2C	P0DJJ0	459 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	NEFH	P12036	1026 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	CTNNA2	P26232	953 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	LIG4	P49917	911 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	MNAT1	P51948	309 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	DMP1	Q13316	513 aa	Predicted RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	WDR93	Q6P2C0	686 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	CPA5	Q8WXQ8	436 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	NR2E1	Q9Y466	385 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	DAAM1	Q9Y4D1	1078 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	C4A	P0C0L4	1744 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	C4B	P0C0L5	1744 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	TGFB1I1	O43294	461 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	SGPL1	O95470	568 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	CD19	P15391	556 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	ITGB5	P18084	799 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	NR1D1	P20393	614 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	QARS	P47897	775 aa	Known RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	SYCP2L	Q5T4T6	812 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	RNF10	Q8N5U6	811 aa	Known RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	RNF146	Q9NTX7	359 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	ASTN1	O14525	1302 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	IRS2	Q9Y4H2	1338 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	ROBO3	Q96MS0	1386 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	ATF7	P17544	494 aa	Predicted RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	IRAK1	P51617	712 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	CXCL9	Q07325	125 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	C15orf52	Q6ZUT6	534 aa	Known RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	ZNF720	Q7Z2F6	126 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	XXYLT1	Q8NBI6	393 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	IPO4	Q8TEX9	1081 aa	Known RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	ACSF2	Q96CM8	615 aa	Predicted RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	RNPC3	Q96LT9	517 aa	Known RBP	13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	HSPBP1	Q9NZL4	362 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	SPATA31A6	Q5VVP1	1343 aa		13.2	□□□□□ -0.3
BCAS3-222	ENST00000589222	IGKV6D-41	A0A0C4DH26	115 aa		13.19	□□□□□ -0.3
BCAS3-222	ENST00000589222	MARCKSL1	P49006	195 aa		13.19	□□□□□ -0.3
BCAS3-222	ENST00000589222	TRAF1	Q13077	416 aa		13.19	□□□□□ -0.3
BCAS3-222	ENST00000589222	EDRF1	Q3B7T1	1238 aa		13.19	□□□□□ -0.3
BCAS3-222	ENST00000589222	FIGN	Q5HY92	759 aa		13.19	□□□□□ -0.3
BCAS3-222	ENST00000589222	CIAPIN1	Q6FI81	312 aa		13.19	□□□□□ -0.3
BCAS3-222	ENST00000589222	PPP4R3CP	Q6ZMV5	832 aa		13.19	□□□□□ -0.3

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