RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 ADGRA3Q8IWK6 1321 aa22.1■■□□□ 1.13
LINC00654-202ENST00000589201 USO1O60763 962 aaKnown RBP22.1■■□□□ 1.13
LINC00654-202ENST00000589201 SFPQP23246 707 aaKnown RBP eCLIP22.1■■□□□ 1.13
LINC00654-202ENST00000589201 ARL2P36404 184 aa22.1■■□□□ 1.13
LINC00654-202ENST00000589201 BTG3Q14201 252 aaPredicted RBP22.1■■□□□ 1.13
LINC00654-202ENST00000589201 MXD4Q14582 209 aaPredicted RBP22.1■■□□□ 1.13
LINC00654-202ENST00000589201 MAEAQ7L5Y9 396 aa22.1■■□□□ 1.13
LINC00654-202ENST00000589201 RNF149Q8NC42 400 aa22.1■■□□□ 1.13
LINC00654-202ENST00000589201 MINDY3Q9H8M7 445 aa22.1■■□□□ 1.13
LINC00654-202ENST00000589201 VWA3AA6NCI4 1184 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 LPXNO60711 386 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 PAN2Q504Q3 1202 aaKnown RBP22.09■■□□□ 1.13
LINC00654-202ENST00000589201 EPC2Q52LR7 807 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 FAM102BQ5T8I3 360 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 KRT79Q5XKE5 535 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 ARL6IP4Q66PJ3 421 aaKnown RBP22.09■■□□□ 1.13
LINC00654-202ENST00000589201 CATSPER4Q7RTX7 472 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 SRGAP1Q7Z6B7 1085 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 TMEM192Q8IY95 271 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 ASAP3Q8TDY4 903 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 GDPD5Q8WTR4 605 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 PPM1EQ8WY54 764 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 MMTAG2Q9BU76 263 aaKnown RBP22.09■■□□□ 1.13
LINC00654-202ENST00000589201 GPRC5CQ9NQ84 441 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 DDX19AQ9NUU7 478 aaKnown RBP22.09■■□□□ 1.13
LINC00654-202ENST00000589201 RNF216Q9NWF9 866 aaPredicted RBP22.09■■□□□ 1.13
LINC00654-202ENST00000589201 MTMR6Q9Y217 621 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 MTCH2Q9Y6C9 303 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 COL4A6Q14031 1691 aa22.09■■□□□ 1.13
LINC00654-202ENST00000589201 SPTBN5Q9NRC6 3674 aaKnown RBP22.08■■□□□ 1.13
LINC00654-202ENST00000589201 ARHGEF35A5YM69 484 aa22.08■■□□□ 1.13
LINC00654-202ENST00000589201 POU3F3P20264 500 aaPredicted RBP22.08■■□□□ 1.13
LINC00654-202ENST00000589201 RESTQ13127 1097 aa22.08■■□□□ 1.13
LINC00654-202ENST00000589201 SF3A1Q15459 793 aaKnown RBP22.08■■□□□ 1.13
LINC00654-202ENST00000589201 CCDC85BQ15834 202 aaPredicted RBP22.08■■□□□ 1.13
LINC00654-202ENST00000589201 PADI6Q6TGC4 694 aa22.08■■□□□ 1.13
LINC00654-202ENST00000589201 CMTR2Q8IYT2 770 aaKnown RBP22.08■■□□□ 1.13
LINC00654-202ENST00000589201 FBXO22Q8NEZ5 403 aa22.08■■□□□ 1.13
LINC00654-202ENST00000589201 SAMD11Q96NU1 681 aa22.08■■□□□ 1.13
LINC00654-202ENST00000589201 POLR3FQ9H1D9 316 aaPredicted RBP22.08■■□□□ 1.13
LINC00654-202ENST00000589201 ELAC1Q9H777 363 aaKnown RBP22.08■■□□□ 1.13
LINC00654-202ENST00000589201 CHST12Q9NRB3 414 aa22.08■■□□□ 1.13
LINC00654-202ENST00000589201 TMEM161AQ9NX61 479 aa22.08■■□□□ 1.13
LINC00654-202ENST00000589201 STX6O43752 255 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 LINC00271P0C7V0 271 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 GLRA2P23416 452 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 CAPSQ13938 189 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 FAM173BQ6P4H8 233 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 ECHDC2Q86YB7 292 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 BHMT2Q9H2M3 363 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 DACT1Q9NYF0 836 aa22.07■■□□□ 1.12
LINC00654-202ENST00000589201 PIN4Q9Y237 131 aaKnown RBP22.07■■□□□ 1.12
LINC00654-202ENST00000589201 MRPL42Q9Y6G3 142 aaKnown RBP22.07■■□□□ 1.12
LINC00654-202ENST00000589201 REV3LO60673 3130 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 A0A0U1RQF3 1178 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 E9PMD0 336 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 GTPBP6O43824 516 aaPredicted RBP22.06■■□□□ 1.12
LINC00654-202ENST00000589201 FGFR1P11362 822 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 CYP11B2P19099 503 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 PHKA2P46019 1235 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 PTENP60484 403 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 TFDP1Q14186 410 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 MICALL1Q8N3F8 863 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 MCPH1Q8NEM0 835 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 CLP1Q92989 425 aaKnown RBP22.06■■□□□ 1.12
LINC00654-202ENST00000589201 DNM3Q9UQ16 869 aa22.06■■□□□ 1.12
LINC00654-202ENST00000589201 PRRC2BQ5JSZ5 2229 aaKnown RBP22.06■■□□□ 1.12
LINC00654-202ENST00000589201 NLRC5Q86WI3 1866 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 UNC80Q8N2C7 3258 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 BMP15O95972 392 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 BMPR1AP36894 532 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 POU5F1BQ06416 359 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 ZRSR1Q15695 479 aaKnown RBP22.05■■□□□ 1.12
LINC00654-202ENST00000589201 TWF2Q6IBS0 349 aaKnown RBP22.05■■□□□ 1.12
LINC00654-202ENST00000589201 RNF169Q8NCN4 708 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 POLD4Q9HCU8 107 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 AGPAT5Q9NUQ2 364 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 CLIC4Q9Y696 253 aa22.05■■□□□ 1.12
LINC00654-202ENST00000589201 TBKBP1A7MCY6 615 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 H3BNC9 293 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 EYA4O95677 639 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 HSP90AA1P07900 732 aaKnown RBP22.04■■□□□ 1.12
LINC00654-202ENST00000589201 HOXA11P31270 313 aaPredicted RBP22.04■■□□□ 1.12
LINC00654-202ENST00000589201 CTNNB1P35222 781 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 GPM6BQ13491 265 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 KCNK18Q7Z418 384 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 ZNF598Q86UK7 904 aaKnown RBP22.04■■□□□ 1.12
LINC00654-202ENST00000589201 IFNLR1Q8IU57 520 aaPredicted RBP22.04■■□□□ 1.12
LINC00654-202ENST00000589201 SLC17A8Q8NDX2 589 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 PNMA5Q96PV4 448 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 TRAIPQ9BWF2 469 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 RNF19AQ9NV58 838 aa22.04■■□□□ 1.12
LINC00654-202ENST00000589201 FNDC1Q4ZHG4 1894 aaPredicted RBP22.04■■□□□ 1.12
LINC00654-202ENST00000589201 COL4A4P53420 1690 aaPredicted RBP22.04■■□□□ 1.12
LINC00654-202ENST00000589201 INO80B-WBP1J3KQ70 363 aa22.03■■□□□ 1.12
LINC00654-202ENST00000589201 EOMESO95936 686 aa22.03■■□□□ 1.12
LINC00654-202ENST00000589201 ATF7P17544 494 aaPredicted RBP22.03■■□□□ 1.12
LINC00654-202ENST00000589201 GRIN1Q05586 938 aa22.03■■□□□ 1.12
LINC00654-202ENST00000589201 HYIQ5T013 277 aa22.03■■□□□ 1.12
LINC00654-202ENST00000589201 SPRYD3Q8NCJ5 442 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms