RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 TCP11Q8WWU5 503 aa23.13■■□□□ 1.29
MBD3-205ENST00000589064 CHST12Q9NRB3 414 aa23.13■■□□□ 1.29
MBD3-205ENST00000589064 TYW1Q9NV66 732 aaKnown RBP23.13■■□□□ 1.29
MBD3-205ENST00000589064 A0A0U1RQF3 1178 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 GJB2P29033 226 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 TOB1P50616 345 aaPredicted RBP23.12■■□□□ 1.29
MBD3-205ENST00000589064 AAK1Q2M2I8 961 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 MCTP1Q6DN14 999 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 CATSPER4Q7RTX7 472 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 KLHL23Q8NBE8 558 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 MTRQ99707 1265 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 XPNPEP1Q9NQW7 623 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 RNF19AQ9NV58 838 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 DACT1Q9NYF0 836 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 HCSTQ9UBK5 93 aa23.12■■□□□ 1.29
MBD3-205ENST00000589064 ASAP2O43150 1006 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 GAS2O43903 313 aaKnown RBP23.11■■□□□ 1.29
MBD3-205ENST00000589064 MED24O75448 989 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 CSPG5O95196 566 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 ITGB1P05556 798 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 XRCC6P12956 609 aaKnown RBP eCLIP23.11■■□□□ 1.29
MBD3-205ENST00000589064 KCNQ1P51787 676 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 TIGD5Q53EQ6 642 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 TCEAL5Q5H9L2 206 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 FERMT3Q86UX7 667 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 P2RX5Q93086 422 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 CASD1Q96PB1 797 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 TMEM117Q9H0C3 514 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 LMAN2LQ9H0V9 348 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 TUFT1Q9NNX1 390 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 PIN4Q9Y237 131 aaKnown RBP23.11■■□□□ 1.29
MBD3-205ENST00000589064 PCDHB6Q9Y5E3 794 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 GTF3C3Q9Y5Q9 886 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 BMP1P13497 986 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 RARRES1P49788 294 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 NAALADL2Q58DX5 795 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 SRGAP1Q7Z6B7 1085 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 RNF149Q8NC42 400 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 SPPL3Q8TCT6 385 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 CCDC43Q96MW1 224 aaKnown RBP23.11■■□□□ 1.29
MBD3-205ENST00000589064 MINDY3Q9H8M7 445 aa23.11■■□□□ 1.29
MBD3-205ENST00000589064 WDR81Q562E7 1941 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 LOXHD1Q8IVV2 1947 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 HOXA2O43364 376 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 DGAT1O75907 488 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 EOMESO95936 686 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 CAMK1Q14012 370 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 TWF2Q6IBS0 349 aaKnown RBP23.1■■□□□ 1.29
MBD3-205ENST00000589064 ZNF598Q86UK7 904 aaKnown RBP23.1■■□□□ 1.29
MBD3-205ENST00000589064 ERMNQ8TAM6 284 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 POLR3CQ9BUI4 534 aaPredicted RBP23.1■■□□□ 1.29
MBD3-205ENST00000589064 NSUN3Q9H649 340 aaKnown RBP23.1■■□□□ 1.29
MBD3-205ENST00000589064 SMC3Q9UQE7 1217 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 PCDHB12Q9Y5F1 795 aa23.1■■□□□ 1.29
MBD3-205ENST00000589064 COL4A4P53420 1690 aaPredicted RBP23.09■■□□□ 1.29
MBD3-205ENST00000589064 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.09■■□□□ 1.29
MBD3-205ENST00000589064 DNAJB1P25685 340 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 PTGDRQ13258 359 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 LRRC55Q6ZSA7 311 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 ABI1Q8IZP0 508 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 NACC1Q96RE7 527 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 BACH2Q9BYV9 841 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 CWH43Q9H720 699 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 UBE2ZQ9H832 354 aaPredicted RBP23.09■■□□□ 1.29
MBD3-205ENST00000589064 AAASQ9NRG9 546 aa23.09■■□□□ 1.29
MBD3-205ENST00000589064 H3BQV1 296 aa23.08■■□□□ 1.29
MBD3-205ENST00000589064 ATF7P17544 494 aaPredicted RBP23.08■■□□□ 1.29
MBD3-205ENST00000589064 PHKA2P46019 1235 aa23.08■■□□□ 1.29
MBD3-205ENST00000589064 MXD4Q14582 209 aaPredicted RBP23.08■■□□□ 1.29
MBD3-205ENST00000589064 LONRF3Q496Y0 759 aa23.08■■□□□ 1.29
MBD3-205ENST00000589064 CLLU1OSQ5K130 101 aa23.08■■□□□ 1.29
MBD3-205ENST00000589064 ADAMTS19Q8TE59 1207 aa23.08■■□□□ 1.29
MBD3-205ENST00000589064 POF1BQ8WVV4 589 aa23.08■■□□□ 1.29
MBD3-205ENST00000589064 TRAIPQ9BWF2 469 aa23.08■■□□□ 1.29
MBD3-205ENST00000589064 USO1O60763 962 aaKnown RBP23.07■■□□□ 1.28
MBD3-205ENST00000589064 RPA1P27694 616 aa23.07■■□□□ 1.28
MBD3-205ENST00000589064 ARL2P36404 184 aa23.07■■□□□ 1.28
MBD3-205ENST00000589064 FXR2P51116 673 aaKnown RBP eCLIP23.07■■□□□ 1.28
MBD3-205ENST00000589064 POTEGQ6S5H5 508 aa23.07■■□□□ 1.28
MBD3-205ENST00000589064 MAEAQ7L5Y9 396 aa23.07■■□□□ 1.28
MBD3-205ENST00000589064 COLGALT1Q8NBJ5 622 aa23.07■■□□□ 1.28
MBD3-205ENST00000589064 HELQQ8TDG4 1101 aa23.07■■□□□ 1.28
MBD3-205ENST00000589064 ASAP3Q8TDY4 903 aa23.07■■□□□ 1.28
MBD3-205ENST00000589064 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.07■■□□□ 1.28
MBD3-205ENST00000589064 HOXA11P31270 313 aaPredicted RBP23.06■■□□□ 1.28
MBD3-205ENST00000589064 LPPQ93052 612 aa23.06■■□□□ 1.28
MBD3-205ENST00000589064 AGPAT5Q9NUQ2 364 aa23.06■■□□□ 1.28
MBD3-205ENST00000589064 LRWD1Q9UFC0 647 aa23.06■■□□□ 1.28
MBD3-205ENST00000589064 DBR1Q9UK59 544 aaKnown RBP23.06■■□□□ 1.28
MBD3-205ENST00000589064 SKIP12755 728 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 KCNA5P22460 613 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 IRS1P35568 1242 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 CCT6AP40227 531 aaKnown RBP23.05■■□□□ 1.28
MBD3-205ENST00000589064 PTENP60484 403 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 TFDP1Q14186 410 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 PDIA5Q14554 519 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 ECM1Q16610 540 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 EP400NLQ6ZTU2 488 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 THNSL1Q8IYQ7 743 aa23.05■■□□□ 1.28
MBD3-205ENST00000589064 POLR3FQ9H1D9 316 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms