RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CALML4Q96GE6 196 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 CHAMP1Q96JM3 812 aa22.44■■□□□ 1.18
DDX39A-207ENST00000588542 AMHP03971 560 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 PLCG1P19174 1290 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 SLC12A3P55017 1021 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 CAPSQ13938 189 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 DSC3Q14574 896 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 RINT1Q6NUQ1 792 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 SYT2Q8N9I0 419 aaPredicted RBP22.43■■□□□ 1.18
DDX39A-207ENST00000588542 RNF149Q8NC42 400 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 RUSC1Q9BVN2 902 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 TSPYL2Q9H2G4 693 aaPredicted RBP22.43■■□□□ 1.18
DDX39A-207ENST00000588542 MINDY3Q9H8M7 445 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 BLOC1S4Q9NUP1 217 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 CFAP45Q9UL16 551 aa22.43■■□□□ 1.18
DDX39A-207ENST00000588542 DNAJB2P25686 324 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 POU5F1BQ06416 359 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 FAM102BQ5T8I3 360 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 C1orf186Q6ZWK4 172 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 MYOCDQ8IZQ8 938 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 TOP1MTQ969P6 601 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 POLD4Q9HCU8 107 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 RCOR1Q9UKL0 485 aa22.42■■□□□ 1.18
DDX39A-207ENST00000588542 YBX2Q9Y2T7 364 aaKnown RBP22.42■■□□□ 1.18
DDX39A-207ENST00000588542 GJB5O95377 273 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 PLA2G4BP0C869 781 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 MYOGP15173 224 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 PTENP60484 403 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 AXDND1Q5T1B0 1012 aaPredicted RBP22.41■■□□□ 1.18
DDX39A-207ENST00000588542 GPR153Q6NV75 609 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 FAM43BQ6ZT52 329 aaPredicted RBP22.41■■□□□ 1.18
DDX39A-207ENST00000588542 SRGAP1Q7Z6B7 1085 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 IFNLR1Q8IU57 520 aaPredicted RBP22.41■■□□□ 1.18
DDX39A-207ENST00000588542 DAW1Q8N136 415 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 CRIPAKQ8N1N5 446 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 KCNG4Q8TDN1 519 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 BSNDQ8WZ55 320 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 INO80BQ9C086 356 aaPredicted RBP22.41■■□□□ 1.18
DDX39A-207ENST00000588542 RGS18Q9NS28 235 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 CHD7Q9P2D1 2997 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 PCDHA11Q9Y5I1 949 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 CDH23Q9H251 3354 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 COL4A6Q14031 1691 aa22.41■■□□□ 1.18
DDX39A-207ENST00000588542 CUTAO60888 179 aa22.4■■□□□ 1.18
DDX39A-207ENST00000588542 RAB30Q15771 203 aa22.4■■□□□ 1.18
DDX39A-207ENST00000588542 RAD54LQ92698 747 aa22.4■■□□□ 1.18
DDX39A-207ENST00000588542 ADAM2Q99965 735 aa22.4■■□□□ 1.18
DDX39A-207ENST00000588542 FNDC1Q4ZHG4 1894 aaPredicted RBP22.39■■□□□ 1.18
DDX39A-207ENST00000588542 A0A087X0B3 334 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 SSBP05455 408 aaKnown RBP eCLIP22.39■■□□□ 1.17
DDX39A-207ENST00000588542 SFPQP23246 707 aaKnown RBP eCLIP22.39■■□□□ 1.17
DDX39A-207ENST00000588542 PHKA2P46019 1235 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 NUCB2P80303 420 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 MAPK7Q13164 816 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 TFDP1Q14186 410 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 ARSHQ5FYA8 562 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 FAM117BQ6P1L5 589 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 RASSF8Q8NHQ8 419 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 NFKBIZQ9BYH8 718 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 MSRAQ9UJ68 235 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 PCDHA7Q9UN72 937 aa22.39■■□□□ 1.17
DDX39A-207ENST00000588542 DENND3A2RUS2 1198 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 C9IYK1 514 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 TLL1O43897 1013 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 UPP2O95045 317 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 GUCY2CP25092 1073 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 HTRA4P83105 476 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-207ENST00000588542 MCM6Q14566 821 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 NAALADL2Q58DX5 795 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 SHC4Q6S5L8 630 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 CATSPER4Q7RTX7 472 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 LEO1Q8WVC0 666 aaPredicted RBP22.38■■□□□ 1.17
DDX39A-207ENST00000588542 KIFAP3Q92845 792 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 TIFAQ96CG3 184 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 NKX2-4Q9H2Z4 354 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 CCDC39Q9UFE4 941 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 ATP6V1DQ9Y5K8 247 aa22.38■■□□□ 1.17
DDX39A-207ENST00000588542 NLRC5Q86WI3 1866 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 LCHNA4D1U4 455 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 HIP1RO75146 1068 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 ARHGEF15O94989 841 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 ANP32AP39687 249 aaKnown RBP22.37■■□□□ 1.17
DDX39A-207ENST00000588542 TXLNAP40222 546 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 SARSP49591 514 aaKnown RBP22.37■■□□□ 1.17
DDX39A-207ENST00000588542 KRT85P78386 507 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 FAM189BP81408 668 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 MBTD1Q05BQ5 628 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 CDCA2Q69YH5 1023 aaPredicted RBP22.37■■□□□ 1.17
DDX39A-207ENST00000588542 SLC24A5Q71RS6 500 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 LARP4BQ92615 738 aaKnown RBP22.37■■□□□ 1.17
DDX39A-207ENST00000588542 RAD9AQ99638 391 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 ZBED2Q9BTP6 218 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 TTYH1Q9H313 450 aaPredicted RBP22.37■■□□□ 1.17
DDX39A-207ENST00000588542 C1orf112Q9NSG2 853 aa22.37■■□□□ 1.17
DDX39A-207ENST00000588542 NPHP3-ACAD11A0A0J9YXS1 232 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 LRRIQ4A6NIV6 560 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 CA3P07451 260 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 ZSCAN20P17040 1043 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-207ENST00000588542 NAMPTP43490 491 aa22.36■■□□□ 1.17
DDX39A-207ENST00000588542 ME1P48163 572 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms