RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
TPM4-209ENST00000588483 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 MED24O75448 989 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 TECP42680 631 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 LAMTOR4Q0VGL1 99 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 PTGDRQ13258 359 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 BTG3Q14201 252 aaPredicted RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 MXD4Q14582 209 aaPredicted RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 NBR1Q14596 966 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 SRGAP1Q7Z6B7 1085 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 PRPF31Q8WWY3 499 aaKnown RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 MRPL38Q96DV4 380 aaKnown RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 INTS4Q96HW7 963 aaKnown RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 C11orf84Q9BUA3 381 aaPredicted RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 NFKBIZQ9BYH8 718 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 MTUS1Q9ULD2 1270 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 PCDHB7Q9Y5E2 793 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 MRPL42Q9Y6G3 142 aaKnown RBP11.7□□□□□ -0.54
TPM4-209ENST00000588483 NCOR1O75376 2440 aa11.7□□□□□ -0.54
TPM4-209ENST00000588483 H3BQV1 296 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 HOXA2O43364 376 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 EOMESO95936 686 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 ATF7P17544 494 aaPredicted RBP11.69□□□□□ -0.54
TPM4-209ENST00000588483 ARL2P36404 184 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 ATP2C1P98194 919 aaPredicted RBP11.69□□□□□ -0.54
TPM4-209ENST00000588483 PTPROQ16827 1216 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 ECHDC2Q86YB7 292 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 ATXN2LQ8WWM7 1075 aaKnown RBP11.69□□□□□ -0.54
TPM4-209ENST00000588483 TMEM143Q96AN5 459 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 ZNF668Q96K58 619 aaPredicted RBP11.69□□□□□ -0.54
TPM4-209ENST00000588483 SCLT1Q96NL6 688 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 NACC1Q96RE7 527 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 RAB34Q9BZG1 259 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 LMAN2LQ9H0V9 348 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 THEGQ9P2T0 379 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 LRFN2Q9ULH4 789 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
TPM4-209ENST00000588483 MYO7AQ13402 2215 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 ZNF623O75123 536 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 PDCP20941 246 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 FGFR4P22455 802 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 CTNNB1P35222 781 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 PTENP60484 403 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 GPM6BQ13491 265 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 TIGD5Q53EQ6 642 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 FAM102BQ5T8I3 360 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 LARP1BQ659C4 914 aaKnown RBP11.68□□□□□ -0.54
TPM4-209ENST00000588483 ARL6IP4Q66PJ3 421 aaKnown RBP11.68□□□□□ -0.54
TPM4-209ENST00000588483 MCTP1Q6DN14 999 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 BRAPQ7Z569 592 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 KCTD17Q8N5Z5 321 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 MCPH1Q8NEM0 835 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 PIGOQ8TEQ8 1089 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 NLRP4Q96MN2 994 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 TMEM117Q9H0C3 514 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 MINDY3Q9H8M7 445 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
TPM4-209ENST00000588483 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
TPM4-209ENST00000588483 SKIP12755 728 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 HOXA11P31270 313 aaPredicted RBP11.67□□□□□ -0.54
TPM4-209ENST00000588483 PHKA2P46019 1235 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 GATMP50440 423 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 RAB27AP51159 221 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 CAPSQ13938 189 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 CCDC85BQ15834 202 aaPredicted RBP11.67□□□□□ -0.54
TPM4-209ENST00000588483 IL17AQ16552 155 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 HYIQ5T013 277 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 CATSPER4Q7RTX7 472 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 RNF149Q8NC42 400 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 ASAP3Q8TDY4 903 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 SNX21Q969T3 373 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 CCDC43Q96MW1 224 aaKnown RBP11.67□□□□□ -0.54
TPM4-209ENST00000588483 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 PRDM6Q9NQX0 595 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 COG5Q9UP83 839 aa11.67□□□□□ -0.54
TPM4-209ENST00000588483 PIN4Q9Y237 131 aaKnown RBP11.67□□□□□ -0.54
TPM4-209ENST00000588483 TBKBP1A7MCY6 615 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 K7ELQ4 463 aaPredicted RBP11.66□□□□□ -0.54
TPM4-209ENST00000588483 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 FGFR1P11362 822 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 CYP11B2P19099 503 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 GLRA2P23416 452 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 AXLP30530 894 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 CAMK1Q14012 370 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 TFDP1Q14186 410 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 ECM1Q16610 540 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 AMHR2Q16671 573 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 CSPP1Q1MSJ5 1256 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 PAN2Q504Q3 1202 aaKnown RBP11.66□□□□□ -0.54
TPM4-209ENST00000588483 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 CLLU1OSQ5K130 101 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms