RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 GLIS3Q8NEA6 775 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 KCNN1Q92952 543 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 FIZ1Q96SL8 496 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 SH2D3AQ9BRG2 576 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 TUBGCP2Q9BSJ2 902 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 METTL14Q9HCE5 456 aaKnown RBP11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 RNF186Q9NXI6 227 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 PHLPP2Q6ZVD8 1323 aa11.55□□□□□ -0.56
CHMP1B-202ENST00000588284 MYH9P35579 1960 aaKnown RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 A6NJR5 290 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 NRDCO43847 1150 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 KPNA6O60684 536 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 TRPA1O75762 1119 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 PPP1R37O75864 691 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 SLC34A2O95436 690 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 LGALS2P05162 132 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 HOXD8P13378 290 aaPredicted RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 CYP2C19P33261 490 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 ARL2P36404 184 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 NPTX2P47972 431 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 VEGFBP49765 207 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 FLT3LGP49771 235 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 MARSP56192 900 aaKnown RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 MXD4Q14582 209 aaPredicted RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 CCDC40Q4G0X9 1142 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 ZC2HC1CQ53FD0 456 aaPredicted RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 PRAMEF19Q5SWL8 479 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 SPECC1LQ69YQ0 1117 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 APTXQ7Z2E3 356 aaKnown RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 CCDC186Q7Z3E2 898 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 TMC6Q7Z403 805 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 FRMD5Q7Z6J6 570 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 VSTM4Q8IW00 320 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 RETREG2Q8NC44 543 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 FBXO22Q8NEZ5 403 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 TMEM174Q8WUU8 243 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 CNOT6LQ96LI5 555 aaKnown RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 NOC4LQ9BVI4 516 aaKnown RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 FGFBP2Q9BYJ0 223 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 POLR3FQ9H1D9 316 aaPredicted RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 VPS16Q9H269 839 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 XPNPEP1Q9NQW7 623 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 FLRT1Q9NZU1 646 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 GNEQ9Y223 722 aaKnown RBP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 LRRC37A2A6NM11 1700 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 COL1A2P08123 1366 aa11.54□□□□□ -0.56
CHMP1B-202ENST00000588284 IGKV6-21A0A0C4DH24 114 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 A0A1W2PQC6 194 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 RRN3P2A6NIE6 340 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 H3BRB1 525 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 SLC16A4O15374 487 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 SLC16A3O15427 465 aaKnown RBP11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TGFB1I1O43294 461 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 NR3C1P04150 777 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 MMP3P08254 477 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TPM1P09493 284 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 AKR1A1P14550 325 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 NR2F2P24468 414 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 MARK3P27448 753 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TMOD1P28289 359 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 HOXD13P35453 343 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 NAMPTP43490 491 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 CPT1AP50416 773 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 PRMT2P55345 433 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 IRX5P78411 483 aaPredicted RBP11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 HTRA3P83110 453 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 CCL14Q16627 93 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 MAN2A1Q16706 1144 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 FKBP15Q5T1M5 1219 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TMEM63BQ5T3F8 832 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 LRRC55Q6ZSA7 311 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 SLC9A9Q8IVB4 645 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 C12orf56Q8IXR9 622 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TMEM161BQ8NDZ6 487 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 DEPTORQ8TB45 409 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 ERO1AQ96HE7 468 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 MKNK1Q9BUB5 465 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TUT1Q9H6E5 874 aaKnown RBP11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 SPC25Q9HBM1 224 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 GPRC5CQ9NQ84 441 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TAB2Q9NYJ8 693 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 TBX20Q9UMR3 447 aa11.53□□□□□ -0.56
CHMP1B-202ENST00000588284 MCM3APO60318 1980 aa11.52□□□□□ -0.56
CHMP1B-202ENST00000588284 DENND3A2RUS2 1198 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 LGALS16A8MUM7 142 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 K7ERI5 159 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 PES1O00541 588 aaKnown RBP11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 DUSP11O75319 330 aaKnown RBP11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 EPB41P11171 864 aaKnown RBP11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 INSRRP14616 1297 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 CTGFP29279 349 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 PSMC2P35998 433 aaKnown RBP11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 EFNA5P52803 228 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 CDC42EP1Q00587 391 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms