RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ZNF668Q96K58 619 aaPredicted RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 TGS1Q96RS0 853 aaKnown RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 TRAIPQ9BWF2 469 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 NFKBIZQ9BYH8 718 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 DDX19AQ9NUU7 478 aaKnown RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 DAXXQ9UER7 740 aaPredicted RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 RWDD3Q9Y3V2 267 aa11.23□□□□□ -0.61
TPM4-207ENST00000588032 MORC2Q9Y6X9 1032 aaPredicted RBP11.23□□□□□ -0.61
TPM4-207ENST00000588032 A0A087WWV3 80 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 A0A0U1RQF3 1178 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 LCHNA4D1U4 455 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 LINC01553A4QN01 128 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 HOXA2O43364 376 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 MGEA5O60502 916 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 USO1O60763 962 aaKnown RBP11.22□□□□□ -0.61
TPM4-207ENST00000588032 EYA4O95677 639 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 EOMESO95936 686 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 SIP14410 1827 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 FOSL2P15408 326 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 UBA7P41226 1012 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 PTENP60484 403 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 PPP2R5AQ15172 486 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 ECM1Q16610 540 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 MICAL3Q7RTP6 2002 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 CATSPER4Q7RTX7 472 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 CMTR2Q8IYT2 770 aaKnown RBP11.22□□□□□ -0.61
TPM4-207ENST00000588032 FIBCD1Q8N539 461 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 RSPH1Q8WYR4 309 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 ZNF689Q96CS4 500 aaPredicted RBP11.22□□□□□ -0.61
TPM4-207ENST00000588032 CDK5RAP3Q96JB5 506 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 ZNF396Q96N95 335 aaPredicted RBP11.22□□□□□ -0.61
TPM4-207ENST00000588032 MMTAG2Q9BU76 263 aaKnown RBP11.22□□□□□ -0.61
TPM4-207ENST00000588032 BHMT2Q9H2M3 363 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 KCNG1Q9UIX4 513 aa11.22□□□□□ -0.61
TPM4-207ENST00000588032 ADGRA3Q8IWK6 1321 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 PP2D1A8MPX8 630 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 POU3F3P20264 500 aaPredicted RBP11.21□□□□□ -0.61
TPM4-207ENST00000588032 GLRA2P23416 452 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 CDC25AP30304 524 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 AXLP30530 894 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 BTG3Q14201 252 aaPredicted RBP11.21□□□□□ -0.61
TPM4-207ENST00000588032 BECN1Q14457 450 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 PTPAQ15257 358 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 ATL3Q6DD88 541 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 CABP7Q86V35 215 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 MYLIPQ8WY64 445 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 ARNTL2Q8WYA1 636 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 KIFAP3Q92845 792 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 CALML4Q96GE6 196 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 TIPINQ9BVW5 301 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 POLR3FQ9H1D9 316 aaPredicted RBP11.21□□□□□ -0.61
TPM4-207ENST00000588032 PRDM12Q9H4Q4 367 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 RC3H2Q9HBD1 1191 aaKnown RBP11.21□□□□□ -0.61
TPM4-207ENST00000588032 BMP2KQ9NSY1 1161 aaPredicted RBP11.21□□□□□ -0.61
TPM4-207ENST00000588032 KCND2Q9NZV8 630 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 SRPRBQ9Y5M8 271 aaKnown RBP11.21□□□□□ -0.61
TPM4-207ENST00000588032 CLIC4Q9Y696 253 aa11.21□□□□□ -0.61
TPM4-207ENST00000588032 COL4A6Q14031 1691 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 RANBP2P49792 3224 aaKnown RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 E9PMD0 336 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 ZNF623O75123 536 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 CSDE1O75534 798 aaKnown RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 ERLIN2O94905 339 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 ARHGEF15O94989 841 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 RB1P06400 928 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 ZSCAN22P10073 491 aaPredicted RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 FGFR4P22455 802 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 RAB27AP51159 221 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 CAPSQ13938 189 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 TWF2Q6IBS0 349 aaKnown RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 ECHDC2Q86YB7 292 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 SYT2Q8N9I0 419 aaPredicted RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 ASAP3Q8TDY4 903 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 CLP1Q92989 425 aaKnown RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 IFT74Q96LB3 600 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 PLVAPQ9BX97 442 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 CCSER1Q9C0I3 900 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 C2orf40Q9H1Z8 148 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 C17orf75Q9HAS0 396 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 AGPAT5Q9NUQ2 364 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 LMCD1Q9NZU5 365 aa11.2□□□□□ -0.62
TPM4-207ENST00000588032 PIN4Q9Y237 131 aaKnown RBP11.2□□□□□ -0.62
TPM4-207ENST00000588032 TTC3P53804 2025 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 C5orf67F2Z3F1 127 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 INO80B-WBP1J3KQ70 363 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 BMPR1AP36894 532 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 NAMPTP43490 491 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
TPM4-207ENST00000588032 GRB10Q13322 594 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 ZRSR1Q15695 479 aaKnown RBP11.19□□□□□ -0.62
TPM4-207ENST00000588032 TMEM119Q4V9L6 283 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 EPC2Q52LR7 807 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 NAALADL2Q58DX5 795 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 FAM173BQ6P4H8 233 aa11.19□□□□□ -0.62
TPM4-207ENST00000588032 C1orf186Q6ZWK4 172 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms