RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 PSPC1Q8WXF1 523 aaKnown RBP22.03■■□□□ 1.12
CIRBP-215ENST00000588030 SAMD11Q96NU1 681 aa22.03■■□□□ 1.12
CIRBP-215ENST00000588030 ADAM2Q99965 735 aa22.03■■□□□ 1.12
CIRBP-215ENST00000588030 COL25A1Q9BXS0 654 aaPredicted RBP22.03■■□□□ 1.12
CIRBP-215ENST00000588030 GCOM2Q9BZD3 368 aaPredicted RBP22.03■■□□□ 1.12
CIRBP-215ENST00000588030 COL4A3BPQ9Y5P4 624 aa22.03■■□□□ 1.12
CIRBP-215ENST00000588030 CLIC4Q9Y696 253 aa22.03■■□□□ 1.12
CIRBP-215ENST00000588030 SPTBN5Q9NRC6 3674 aaKnown RBP22.03■■□□□ 1.12
CIRBP-215ENST00000588030 DENND3A2RUS2 1198 aa22.02■■□□□ 1.12
CIRBP-215ENST00000588030 DGAT1O75907 488 aa22.02■■□□□ 1.12
CIRBP-215ENST00000588030 SRGAP2CP0DJJ0 459 aa22.02■■□□□ 1.12
CIRBP-215ENST00000588030 DARSP14868 501 aaKnown RBP22.02■■□□□ 1.12
CIRBP-215ENST00000588030 ODR4Q5SWX8 454 aa22.02■■□□□ 1.12
CIRBP-215ENST00000588030 ZNF710Q8N1W2 664 aa22.02■■□□□ 1.12
CIRBP-215ENST00000588030 XPNPEP1Q9NQW7 623 aa22.02■■□□□ 1.12
CIRBP-215ENST00000588030 RGS18Q9NS28 235 aa22.02■■□□□ 1.12
CIRBP-215ENST00000588030 DDX19AQ9NUU7 478 aaKnown RBP22.02■■□□□ 1.12
CIRBP-215ENST00000588030 ARHGEF35A5YM69 484 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 XRCC6P12956 609 aaKnown RBP eCLIP22.01■■□□□ 1.11
CIRBP-215ENST00000588030 CDC42EP1Q00587 391 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 DSC3Q14574 896 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 ARL6IP4Q66PJ3 421 aaKnown RBP22.01■■□□□ 1.11
CIRBP-215ENST00000588030 TCP11Q8WWU5 503 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 DBR1Q9UK59 544 aaKnown RBP22.01■■□□□ 1.11
CIRBP-215ENST00000588030 STK24Q9Y6E0 443 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 REV3LO60673 3130 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 C9IYK1 514 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 H3BNC9 293 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 GAS2O43903 313 aaKnown RBP22.01■■□□□ 1.11
CIRBP-215ENST00000588030 BMP15O95972 392 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 STAG3L1P0CL83 205 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 SARSP49591 514 aaKnown RBP22.01■■□□□ 1.11
CIRBP-215ENST00000588030 FAM189BP81408 668 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 LAMTOR4Q0VGL1 99 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 BTG3Q14201 252 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-215ENST00000588030 PLIN2Q99541 437 aa22.01■■□□□ 1.11
CIRBP-215ENST00000588030 ZSCAN16Q9H4T2 348 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-215ENST00000588030 ADGRA3Q8IWK6 1321 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 BMPR1AP36894 532 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 GATMP50440 423 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 GPM6BQ13491 265 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 SLC24A5Q71RS6 500 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 ZNF410Q86VK4 478 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 RNF149Q8NC42 400 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 ATXN2LQ8WWM7 1075 aaKnown RBP22■■□□□ 1.11
CIRBP-215ENST00000588030 CLP1Q92989 425 aaKnown RBP22■■□□□ 1.11
CIRBP-215ENST00000588030 MMTAG2Q9BU76 263 aaKnown RBP22■■□□□ 1.11
CIRBP-215ENST00000588030 BHMT2Q9H2M3 363 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 C1orf112Q9NSG2 853 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 THEGQ9P2T0 379 aa22■■□□□ 1.11
CIRBP-215ENST00000588030 COL4A6Q14031 1691 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 VCANP13611 3396 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 E9PMD0 336 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 MUTP22033 750 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 MARCKSP29966 332 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-215ENST00000588030 GRIN1Q05586 938 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 FOXD4L6Q3SYB3 417 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-215ENST00000588030 PADI6Q6TGC4 694 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 FOXD4L3Q6VB84 417 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-215ENST00000588030 ASAP3Q8TDY4 903 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 POLR3FQ9H1D9 316 aaPredicted RBP21.99■■□□□ 1.11
CIRBP-215ENST00000588030 GPRC5CQ9NQ84 441 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 PCDHB7Q9Y5E2 793 aa21.99■■□□□ 1.11
CIRBP-215ENST00000588030 C5orf67F2Z3F1 127 aa21.98■■□□□ 1.11
CIRBP-215ENST00000588030 ZSCAN20P17040 1043 aaPredicted RBP21.98■■□□□ 1.11
CIRBP-215ENST00000588030 SKIV2LQ15477 1246 aaKnown RBP21.98■■□□□ 1.11
CIRBP-215ENST00000588030 FAM102BQ5T8I3 360 aa21.98■■□□□ 1.11
CIRBP-215ENST00000588030 CMTR2Q8IYT2 770 aaKnown RBP21.98■■□□□ 1.11
CIRBP-215ENST00000588030 CDK5RAP3Q96JB5 506 aa21.98■■□□□ 1.11
CIRBP-215ENST00000588030 IFT122Q9HBG6 1241 aa21.98■■□□□ 1.11
CIRBP-215ENST00000588030 LRFN2Q9ULH4 789 aa21.98■■□□□ 1.11
CIRBP-215ENST00000588030 DNM3Q9UQ16 869 aa21.98■■□□□ 1.11
CIRBP-215ENST00000588030 MRPL42Q9Y6G3 142 aaKnown RBP21.98■■□□□ 1.11
CIRBP-215ENST00000588030 RB1P06400 928 aa21.97■■□□□ 1.11
CIRBP-215ENST00000588030 SFPQP23246 707 aaKnown RBP eCLIP21.97■■□□□ 1.11
CIRBP-215ENST00000588030 CTNNB1P35222 781 aa21.97■■□□□ 1.11
CIRBP-215ENST00000588030 PKP1Q13835 747 aa21.97■■□□□ 1.11
CIRBP-215ENST00000588030 CATSPER4Q7RTX7 472 aa21.97■■□□□ 1.11
CIRBP-215ENST00000588030 ASB2Q96Q27 587 aa21.97■■□□□ 1.11
CIRBP-215ENST00000588030 USP28Q96RU2 1077 aa21.97■■□□□ 1.11
CIRBP-215ENST00000588030 INO80BQ9C086 356 aaPredicted RBP21.97■■□□□ 1.11
CIRBP-215ENST00000588030 POLD4Q9HCU8 107 aa21.97■■□□□ 1.11
CIRBP-215ENST00000588030 ASAP2O43150 1006 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 MRPS5P82675 430 aaKnown RBP21.96■■□□□ 1.11
CIRBP-215ENST00000588030 MXD4Q14582 209 aaPredicted RBP21.96■■□□□ 1.11
CIRBP-215ENST00000588030 PTPAQ15257 358 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 PAN2Q504Q3 1202 aaKnown RBP21.96■■□□□ 1.11
CIRBP-215ENST00000588030 TJAP1Q5JTD0 557 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 KCNK18Q7Z418 384 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 CABP7Q86V35 215 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 MCPH1Q8NEM0 835 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 MRPL38Q96DV4 380 aaKnown RBP21.96■■□□□ 1.11
CIRBP-215ENST00000588030 ZSCAN22P10073 491 aaPredicted RBP21.96■■□□□ 1.11
CIRBP-215ENST00000588030 GLRA2P23416 452 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 ARL2P36404 184 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 TFF2Q03403 129 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 TFDP1Q14186 410 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 RASSF8Q8NHQ8 419 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 PNMA5Q96PV4 448 aa21.96■■□□□ 1.11
CIRBP-215ENST00000588030 MINDY3Q9H8M7 445 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms