RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 GJA10Q969M2 543 aa17.06■□□□□ 0.32
HDAC5-206ENST00000587776 ASIC4Q96FT7 647 aa17.06■□□□□ 0.32
HDAC5-206ENST00000587776 SNX14Q9Y5W7 946 aa17.06■□□□□ 0.32
HDAC5-206ENST00000587776 HCFC2Q9Y5Z7 792 aa17.06■□□□□ 0.32
HDAC5-206ENST00000587776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.05■□□□□ 0.32
HDAC5-206ENST00000587776 C2orf71A6NGG8 1288 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 RPS6KB1P23443 525 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
HDAC5-206ENST00000587776 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
HDAC5-206ENST00000587776 ITIH3Q06033 890 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 MTMR3Q13615 1198 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 TRIM22Q8IYM9 498 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 MRPL43Q8N983 215 aaKnown RBP17.05■□□□□ 0.32
HDAC5-206ENST00000587776 KREMEN2Q8NCW0 462 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 TBCKQ8TEA7 893 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 SLC5A5Q92911 643 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 NECTIN4Q96NY8 510 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 POMKQ9H5K3 350 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 CDH22Q9UJ99 828 aa17.05■□□□□ 0.32
HDAC5-206ENST00000587776 DENND4AQ7Z401 1863 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 SPDYE4A6NLX3 237 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 CLASP2O75122 1294 aaKnown RBP17.04■□□□□ 0.32
HDAC5-206ENST00000587776 CXCL14O95715 111 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 IFNAR1P17181 557 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 PSMA5P28066 241 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 MTHFRP42898 656 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 CDC42EP1Q00587 391 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 RNASELQ05823 741 aaKnown RBP17.04■□□□□ 0.32
HDAC5-206ENST00000587776 TCF15Q12870 199 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 DRP2Q13474 957 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 LONRF3Q496Y0 759 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 XKR3Q5GH77 459 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
HDAC5-206ENST00000587776 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
HDAC5-206ENST00000587776 RHPN2Q8IUC4 686 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 VPS52Q8N1B4 723 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 RDM1Q8NG50 284 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 RIPOR3Q96MK2 946 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 INO80BQ9C086 356 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-206ENST00000587776 ADAM7Q9H2U9 754 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
HDAC5-206ENST00000587776 SH3GLB2Q9NR46 395 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 CHST12Q9NRB3 414 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 FAM86C1Q9NVL1 165 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 PIN4Q9Y237 131 aaKnown RBP17.04■□□□□ 0.32
HDAC5-206ENST00000587776 INPP5FQ9Y2H2 1132 aa17.04■□□□□ 0.32
HDAC5-206ENST00000587776 A0A087WZ62 844 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 CARNS1A5YM72 827 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 TMEM150BA6NC51 233 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 C2CD4DB7Z1M9 353 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 SKIP12755 728 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 AVPR2P30518 371 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 HSPA4P34932 840 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 PHKA2P46019 1235 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 SSRP1Q08945 709 aaKnown RBP17.03■□□□□ 0.32
HDAC5-206ENST00000587776 NTRK3Q16288 839 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 GLB1LQ6UWU2 654 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 RSPH1Q8WYR4 309 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 ATOH1Q92858 354 aaPredicted RBP17.03■□□□□ 0.32
HDAC5-206ENST00000587776 KCNB2Q92953 911 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 LPPQ93052 612 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 SH2D3AQ9BRG2 576 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 FDXACB1Q9BRP7 624 aaPredicted RBP17.03■□□□□ 0.32
HDAC5-206ENST00000587776 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 IRF2BPLQ9H1B7 796 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 DZANK1Q9NVP4 752 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 SORCS3Q9UPU3 1222 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 ARID2Q68CP9 1835 aa17.03■□□□□ 0.32
HDAC5-206ENST00000587776 C2orf16Q68DN1 1984 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 DDX11L8A8MPP1 907 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 PSMD10O75832 226 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 TDP2O95551 362 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 TARBP2Q15633 366 aaKnown RBP17.02■□□□□ 0.32
HDAC5-206ENST00000587776 Q4G0T1 1027 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 CATSPER4Q7RTX7 472 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 UBALD2Q8IYN6 164 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 TDRD5Q8NAT2 981 aaKnown RBP17.02■□□□□ 0.32
HDAC5-206ENST00000587776 AUTS2Q8WXX7 1259 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 NLRP4Q96MN2 994 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 NIFKQ9BYG3 293 aaKnown RBP17.02■□□□□ 0.32
HDAC5-206ENST00000587776 ZBP1Q9H171 429 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.32
HDAC5-206ENST00000587776 DBR1Q9UK59 544 aaKnown RBP17.02■□□□□ 0.32
HDAC5-206ENST00000587776 PCDHA4Q9UN74 947 aa17.02■□□□□ 0.32
HDAC5-206ENST00000587776 CPLX1O14810 134 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 PDGFBP01127 241 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-206ENST00000587776 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
HDAC5-206ENST00000587776 RAB27AP51159 221 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 GIT2Q14161 759 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 NOMO2Q5JPE7 1267 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 ZNF410Q86VK4 478 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 FBXL16Q8N461 479 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 C12orf76Q8N812 135 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-206ENST00000587776 JPH2Q9BR39 696 aaPredicted RBP17.01■□□□□ 0.31
HDAC5-206ENST00000587776 AGXT2Q9BYV1 514 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 FAM105AQ9NUU6 356 aa17.01■□□□□ 0.31
HDAC5-206ENST00000587776 TDRD15B5MCY1 1934 aaKnown RBP17.01■□□□□ 0.31
HDAC5-206ENST00000587776 EDIL3O43854 480 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms