RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FAM178BQ8IXR5 827 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 SLC5A5Q92911 643 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 CARD9Q9H257 536 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 AGPAT3Q9NRZ7 376 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 FRMD4BQ9Y2L6 1034 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 SMCHD1A6NHR9 2005 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 ONECUT3O60422 494 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 ABCB4P21439 1286 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 PTENP60484 403 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 FKBP1AP62942 108 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 DHX9Q08211 1270 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 STXBP4Q6ZWJ1 553 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 INTS2Q9H0H0 1204 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 DAAM1Q9Y4D1 1078 aa15.4■□□□□ 0.06
CDK5RAP3-237ENST00000585163 A0A1W2PRG0 241 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 CHMP2AO43633 222 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 FSBPO95073 299 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 GH2P01242 217 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 MUTP22033 750 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PPP2R5EQ16537 467 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 KCTD19Q17RG1 926 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 C3orf20Q8ND61 904 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 RAB17Q9H0T7 212 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TMX4Q9H1E5 349 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 KCND2Q9NZV8 630 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ODF2LQ9ULJ1 636 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TRIM49P0CI25 452 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TRIM49CP0CI26 452 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 FNTAP49354 379 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PSEN1P49768 467 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 CYP2J2P51589 502 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PRELPP51888 382 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 SPDYCQ5MJ68 293 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 DACT2Q5SW24 774 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 RBM26Q5T8P6 1007 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ATP8B4Q8TF62 1192 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ARHGEF26Q96DR7 871 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 NAP1L3Q99457 506 aaPredicted RBP15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TXLNGYQ9BZA5 131 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 DPH5Q9H2P9 285 aa15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PPANQ9NQ55 473 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-237ENST00000585163 RBBP6Q7Z6E9 1792 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ATRNL1Q5VV63 1379 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ANKRD62A6NC57 917 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TRAPPC3O43617 180 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PPFIA2O75334 1257 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TNFAIP3P21580 790 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PPP2R2AP63151 447 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 KIF22Q14807 665 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 SPICE1Q8N0Z3 855 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PRPF38AQ8NAV1 312 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 NACC1Q96RE7 527 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TRIM51Q9BSJ1 452 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 THAP2Q9H0W7 228 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 SYNPO2Q9UMS6 1093 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 GMNCA6NCL1 334 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 CFBP00751 764 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 RFX1P22670 979 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 STAT2P52630 851 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 MYL7Q01449 175 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TRAF1Q13077 416 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ODR4Q5SWX8 454 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 FBXW10Q5XX13 1052 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PHLDB3Q6NSJ2 640 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 C6orf89Q6UWU4 347 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PALB2Q86YC2 1186 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 SLC9A9Q8IVB4 645 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 SEPT12Q8IYM1 358 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 CYFIP2Q96F07 1278 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 FMO2Q99518 471 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 TAS2R14Q9NYV8 317 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 WRAP73Q9P2S5 460 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 CAPN7Q9Y6W3 813 aa15.38■□□□□ 0.05
CDK5RAP3-237ENST00000585163 GAS7O60861 476 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PAEPP09466 180 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 DR1Q01658 176 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 BFSP1Q12934 665 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 PRPF4BQ13523 1007 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 RRP1BQ14684 758 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 CLUL1Q15846 466 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ODF2Q5BJF6 829 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 DUPD1Q68J44 220 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 LMO3Q8TAP4 145 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 STRA6Q9BX79 667 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 NOVA2Q9UNW9 492 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 COG5Q9UP83 839 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 HNRNPH1P31943 449 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 HADHBP55084 474 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 EIF3BP55884 814 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ERP44Q9BS26 406 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 ZDHHC18Q9NUE0 388 aa15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 CNOT8Q9UFF9 292 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-237ENST00000585163 SCN9AQ15858 1988 aa15.36■□□□□ 0.05
CDK5RAP3-237ENST00000585163 UBAP1LF5GYI3 381 aa15.36■□□□□ 0.05
CDK5RAP3-237ENST00000585163 FOXN3O00409 490 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-237ENST00000585163 GUCY2CP25092 1073 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms