RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 NLRP7Q8WX94 980 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 CEP89Q96ST8 783 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 TCF25Q9BQ70 676 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 JPH2Q9BR39 696 aaPredicted RBP16.89■□□□□ 0.29
VAPA-209ENST00000585042 S1PR5Q9H228 398 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 NCOA5Q9HCD5 579 aaKnown RBP16.89■□□□□ 0.29
VAPA-209ENST00000585042 CYP46A1Q9Y6A2 500 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 CPLX1O14810 134 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 STBD1O95210 358 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 ALDH7A1P49419 539 aaKnown RBP16.88■□□□□ 0.29
VAPA-209ENST00000585042 ZXDAP98168 799 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 ANKRD54Q6NXT1 300 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 MRPL43Q8N983 215 aaKnown RBP16.88■□□□□ 0.29
VAPA-209ENST00000585042 VN1R2Q8NFZ6 395 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 FBXL18Q96ME1 805 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 SCLT1Q96NL6 688 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 PRRX2Q99811 253 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 ENTPD7Q9NQZ7 604 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 HCSTQ9UBK5 93 aa16.88■□□□□ 0.29
VAPA-209ENST00000585042 CHMP2AO43633 222 aa16.87■□□□□ 0.29
VAPA-209ENST00000585042 DKC1O60832 514 aaKnown RBP eCLIP16.87■□□□□ 0.29
VAPA-209ENST00000585042 MAFO75444 373 aaPredicted RBP16.87■□□□□ 0.29
VAPA-209ENST00000585042 SFPQP23246 707 aaKnown RBP eCLIP16.87■□□□□ 0.298e-6■■■■□ 25.1
VAPA-209ENST00000585042 SMC1AQ14683 1233 aaKnown RBP16.87■□□□□ 0.29
VAPA-209ENST00000585042 CLLU1OSQ5K130 101 aa16.87■□□□□ 0.29
VAPA-209ENST00000585042 PLPP4Q5VZY2 271 aa16.87■□□□□ 0.29
VAPA-209ENST00000585042 SLC39A11Q8N1S5 342 aa16.87■□□□□ 0.29
VAPA-209ENST00000585042 ETNPPLQ8TBG4 499 aa16.87■□□□□ 0.29
VAPA-209ENST00000585042 PPME1Q9Y570 386 aa16.87■□□□□ 0.29
VAPA-209ENST00000585042 TMEM221A6NGB7 291 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 M0R296 226 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 ZNF623O75123 536 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 TECP42680 631 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 PSMC5P62195 406 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 NHLH1Q02575 133 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 NONOQ15233 471 aaKnown RBP eCLIP16.86■□□□□ 0.292e-7■■□□□ 12.8
VAPA-209ENST00000585042 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 KRT25Q7Z3Z0 450 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 CASP10Q92851 521 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 RPGRIP1Q96KN7 1286 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 FAM20AQ96MK3 541 aa16.86■□□□□ 0.29
VAPA-209ENST00000585042 SEPT9Q9UHD8 586 aaPredicted RBP16.86■□□□□ 0.29
VAPA-209ENST00000585042 TECTAO75443 2155 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 DDX11L8A8MPP1 907 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 HIDE1A8MVS5 230 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 TDP2O95551 362 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 PHKA2P46019 1235 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 RAB27AP51159 221 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 POLGP54098 1239 aaPredicted RBP16.85■□□□□ 0.29
VAPA-209ENST00000585042 ITIH3Q06033 890 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 SIGLEC14Q08ET2 396 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 GIT2Q14161 759 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 NPY5RQ15761 445 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 MTERF2Q49AM1 385 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 PPP4R3AQ6IN85 833 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 SYCE2Q6PIF2 218 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 ALYREFQ86V81 257 aaKnown RBP16.85■□□□□ 0.29
VAPA-209ENST00000585042 RNF169Q8NCN4 708 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 HELQQ8TDG4 1101 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 PBXIP1Q96AQ6 731 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 SUCLA2Q9P2R7 463 aaPredicted RBP16.85■□□□□ 0.29
VAPA-209ENST00000585042 STK39Q9UEW8 545 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
VAPA-209ENST00000585042 IRAK3Q9Y616 596 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
VAPA-209ENST00000585042 A0A087WZ62 844 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 C2orf71A6NGG8 1288 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 CDKL5O76039 1030 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 GCFC2P16383 781 aaKnown RBP16.84■□□□□ 0.29
VAPA-209ENST00000585042 XBP1P17861 261 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 QARSP47897 775 aaKnown RBP16.84■□□□□ 0.29
VAPA-209ENST00000585042 BCAR1P56945 870 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 RBM10P98175 930 aaKnown RBP16.84■□□□□ 0.29
VAPA-209ENST00000585042 PPP2R5CQ13362 524 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 DRP2Q13474 957 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 GJA10Q969M2 543 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 TMEM169Q96HH4 297 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 ZNF668Q96K58 619 aaPredicted RBP16.84■□□□□ 0.29
VAPA-209ENST00000585042 NECTIN4Q96NY8 510 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 NAP1L4Q99733 375 aaKnown RBP16.84■□□□□ 0.29
VAPA-209ENST00000585042 FDXACB1Q9BRP7 624 aaPredicted RBP16.84■□□□□ 0.29
VAPA-209ENST00000585042 NR2E1Q9Y466 385 aa16.84■□□□□ 0.29
VAPA-209ENST00000585042 TBX3O15119 743 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 CXCL14O95715 111 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 FGFR4P22455 802 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 TWF2Q6IBS0 349 aaKnown RBP16.83■□□□□ 0.28
VAPA-209ENST00000585042 CES5AQ6NT32 575 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 GLB1LQ6UWU2 654 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 ANO5Q75V66 913 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 DDX53Q86TM3 631 aaKnown RBP16.83■□□□□ 0.28
VAPA-209ENST00000585042 RHPN2Q8IUC4 686 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 SUGP1Q8IWZ8 645 aaKnown RBP16.83■□□□□ 0.28
VAPA-209ENST00000585042 FBXL6Q8N531 539 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 PGBD4Q96DM1 585 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 ADAM7Q9H2U9 754 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 KCNMB3Q9NPA1 279 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 CYP26B1Q9NR63 512 aa16.83■□□□□ 0.28
VAPA-209ENST00000585042 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms