RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 BBXQ8WY36 941 aaPredicted RBP20.53■□□□□ 0.88
TOP3A-220ENST00000585031 LPPQ93052 612 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 IGSF21Q96ID5 467 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 AKT3Q9Y243 479 aa20.53■□□□□ 0.88
TOP3A-220ENST00000585031 ZC3H11AO75152 810 aaKnown RBP eCLIP20.52■□□□□ 0.88
TOP3A-220ENST00000585031 CFHP08603 1231 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 SREBF1P36956 1147 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 CLK2P49760 499 aaKnown RBP20.52■□□□□ 0.88
TOP3A-220ENST00000585031 MIS18BP1Q6P0N0 1132 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 NFXL1Q6ZNB6 911 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 DDX53Q86TM3 631 aaKnown RBP20.52■□□□□ 0.88
TOP3A-220ENST00000585031 CKAP2LQ8IYA6 745 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 FANCBQ8NB91 859 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 MAP4K1Q92918 833 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 LRRC2Q9BYS8 371 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 NRDE2Q9H7Z3 1164 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 DOCK6Q96HP0 2047 aa20.52■□□□□ 0.88
TOP3A-220ENST00000585031 GALTP07902 379 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 DARSP14868 501 aaKnown RBP20.51■□□□□ 0.87
TOP3A-220ENST00000585031 GPC3P51654 580 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 BMS1Q14692 1282 aaKnown RBP20.51■□□□□ 0.87
TOP3A-220ENST00000585031 PTPN14Q15678 1187 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 RSPO4Q2I0M5 234 aaPredicted RBP20.51■□□□□ 0.87
TOP3A-220ENST00000585031 CCDC149Q6ZUS6 474 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 PLA2G4DQ86XP0 818 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 SUMF1Q8NBK3 374 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 CRYGNQ8WXF5 182 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 IGSF9Q9P2J2 1179 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 DNAJB4Q9UDY4 337 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 CNTNAP5Q8WYK1 1306 aa20.51■□□□□ 0.87
TOP3A-220ENST00000585031 CCDC69A6NI79 296 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 IPO5O00410 1097 aaKnown RBP20.5■□□□□ 0.87
TOP3A-220ENST00000585031 SGSM2O43147 1006 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 ZNF862O60290 1169 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 LILRB3O75022 631 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 SP9P0CG40 484 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 CLCN4P51793 760 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 POLGP54098 1239 aaPredicted RBP20.5■□□□□ 0.87
TOP3A-220ENST00000585031 FUT2Q10981 343 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 DRP2Q13474 957 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 TTC22Q5TAA0 569 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 NIPA1Q7RTP0 329 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 KLHL5Q96PQ7 755 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 TBC1D13Q9NVG8 400 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 DLGAP2Q9P1A6 1054 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 GABBR1Q9UBS5 961 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 CA14Q9ULX7 337 aa20.5■□□□□ 0.87
TOP3A-220ENST00000585031 RBM8AQ9Y5S9 174 aaKnown RBP20.5■□□□□ 0.87
TOP3A-220ENST00000585031 COL4A3Q01955 1670 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 FOSP01100 380 aaPredicted RBP20.49■□□□□ 0.87
TOP3A-220ENST00000585031 ZNF76P36508 570 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 SLC11A1P49279 550 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 NAPAP54920 295 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 TBC1D8BQ0IIM8 1120 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 GIT2Q14161 759 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 LETM2Q2VYF4 491 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 ZC3H14Q6PJT7 736 aaKnown RBP20.49■□□□□ 0.87
TOP3A-220ENST00000585031 POTEGQ6S5H5 508 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 MTA3Q9BTC8 594 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 SFXN1Q9H9B4 322 aa20.49■□□□□ 0.87
TOP3A-220ENST00000585031 STK25O00506 426 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 MAGEB2O15479 319 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 DCNP07585 359 aaKnown RBP20.48■□□□□ 0.87
TOP3A-220ENST00000585031 CNPP09543 421 aaKnown RBP20.48■□□□□ 0.87
TOP3A-220ENST00000585031 LIFRP42702 1097 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 PHKA2P46019 1235 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 ZNF280BQ86YH2 543 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 TMTC2Q8N394 836 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 TMEM87AQ8NBN3 555 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 HINFPQ9BQA5 517 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 MRPL9Q9BYD2 267 aaKnown RBP20.48■□□□□ 0.87
TOP3A-220ENST00000585031 CHD6Q8TD26 2715 aa20.48■□□□□ 0.87
TOP3A-220ENST00000585031 SMCO2A6NFE2 343 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 POTEMA6NI47 508 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 SSBP05455 408 aaKnown RBP eCLIP20.47■□□□□ 0.87
TOP3A-220ENST00000585031 CALM1P0DP23 149 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 CALM2P0DP24 149 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 CALM3P0DP25 149 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 MYBP10242 640 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 GLULP15104 373 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 MCM5P33992 734 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
TOP3A-220ENST00000585031 ADCY7P51828 1080 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 SPECC1Q5M775 1068 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 JAKMIP3Q5VZ66 844 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 ZNF746Q6NUN9 644 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-220ENST00000585031 MICU3Q86XE3 530 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 C1orf210Q8IVY1 113 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 SLC44A3Q8N4M1 653 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 TMEM87BQ96K49 555 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 MYADMQ96S97 322 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 MAP7D2Q96T17 732 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 TBC1D17Q9HA65 648 aa20.47■□□□□ 0.87
TOP3A-220ENST00000585031 MAP1BP46821 2468 aaKnown RBP20.47■□□□□ 0.87
TOP3A-220ENST00000585031 OFD1O75665 1012 aa20.46■□□□□ 0.87
TOP3A-220ENST00000585031 UGCGQ16739 394 aa20.46■□□□□ 0.87
TOP3A-220ENST00000585031 PHLDB3Q6NSJ2 640 aa20.46■□□□□ 0.87
TOP3A-220ENST00000585031 PPFIBP1Q86W92 1011 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms