RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 SMTNP53814 917 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 MYL7Q01449 175 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 EPHA7Q15375 998 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 TMCO3Q6UWJ1 677 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 DAW1Q8N136 415 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 ACSF2Q96CM8 615 aaPredicted RBP11.2□□□□□ -0.62
RFFL-212ENST00000584655 SPATC1LQ9H0A9 340 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 KLHL11Q9NVR0 708 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 BCORQ6W2J9 1755 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 CYP26A1O43174 497 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 CTAGE8P0CG41 777 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 KLRC1P26715 233 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 CTAGE4Q8IX94 777 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
RFFL-212ENST00000584655 OSGEPQ9NPF4 335 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 TAS2R14Q9NYV8 317 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 WNK3Q9BYP7 1800 aa11.2□□□□□ -0.62
RFFL-212ENST00000584655 PALMO75781 387 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 UCHL3P15374 230 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 NPTX2P47972 431 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 AADACL2Q6P093 401 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 C1orf186Q6ZWK4 172 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 SLC7A3Q8WY07 619 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 MRIQ9BWK5 157 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 K7ERI5 159 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 RGS20O76081 388 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 ARIH2O95376 493 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 YY1P25490 414 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 TMOD1P28289 359 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 MESDQ14696 234 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 AMHR2Q16671 573 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 GLRA4Q5JXX5 417 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 GBP6Q6ZN66 633 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
RFFL-212ENST00000584655 ASTN1O14525 1302 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 ZBTB22O15209 634 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 EVI5O60447 810 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 CD19P15391 556 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 CYP2C19P33261 490 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 PSMC2P35998 433 aaKnown RBP11.19□□□□□ -0.62
RFFL-212ENST00000584655 PPP3CAQ08209 521 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 SMAD1Q15797 465 aaKnown RBP11.19□□□□□ -0.62
RFFL-212ENST00000584655 ZNF720Q7Z2F6 126 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 DAAM2Q86T65 1068 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 MRRFQ96E11 262 aaKnown RBP11.19□□□□□ -0.62
RFFL-212ENST00000584655 IFT74Q96LB3 600 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 PARD6BQ9BYG5 372 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 ZNF302Q9NR11 478 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 HSPBP1Q9NZL4 362 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 FBXO40Q9UH90 709 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 COL11A2P13942 1736 aaPredicted RBP11.19□□□□□ -0.62
RFFL-212ENST00000584655 FOXN3O00409 490 aaPredicted RBP11.19□□□□□ -0.62
RFFL-212ENST00000584655 DYNC1LI2O43237 492 aaPredicted RBP11.19□□□□□ -0.62
RFFL-212ENST00000584655 CLCN6P51797 869 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 LRRC63Q05C16 580 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 SYCP2LQ5T4T6 812 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 B4GALNT4Q76KP1 1039 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 HDAC7Q8WUI4 952 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 TATDN2Q93075 761 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 PANX2Q96RD6 677 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 CTTNBP2NLQ9P2B4 639 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 CAPN11Q9UMQ6 739 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 HES2Q9Y543 173 aa11.19□□□□□ -0.62
RFFL-212ENST00000584655 C10orf71Q711Q0 1435 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 TNFAIP3P21580 790 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 RPS12P25398 132 aaKnown RBP11.18□□□□□ -0.62
RFFL-212ENST00000584655 ZNF280AP59817 542 aaPredicted RBP11.18□□□□□ -0.62
RFFL-212ENST00000584655 PSMC5P62195 406 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 IQCEQ6IPM2 695 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 BTNL9Q6UXG8 535 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 CATSPERGQ6ZRH7 1159 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.18□□□□□ -0.62
RFFL-212ENST00000584655 ZNF507Q8TCN5 953 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 MMP19Q99542 508 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 CACNG4Q9UBN1 327 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 POLR2AP24928 1970 aaKnown RBP11.18□□□□□ -0.62
RFFL-212ENST00000584655 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 TLR2O60603 784 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 CTSHP09668 335 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 Q4G0T1 1027 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 ALKBH5Q6P6C2 394 aaKnown RBP11.18□□□□□ -0.62
RFFL-212ENST00000584655 TAS1R2Q8TE23 839 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 NAV1Q8NEY1 1877 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 B4GALT5O43286 388 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 CCP110O43303 1012 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 PON1P27169 355 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 STAT5BP51692 787 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 KRT83P78385 493 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 STRN3Q13033 797 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 ARHGEF19Q8IW93 802 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 RETREG2Q8NC44 543 aa11.18□□□□□ -0.62
RFFL-212ENST00000584655 SLC5A5Q92911 643 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms