RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CBWD5Q5RIA9 395 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 POTEAQ6S8J7 498 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 GMCL1P1Q8NEA9 526 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 CSADQ9Y600 493 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 TLR2O60603 784 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 TUBBP07437 444 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 POTEJP0CG39 1038 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 TUBB4BP68371 445 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 TKFCQ3LXA3 575 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 GNPTABQ3T906 1256 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 FRMD5Q7Z6J6 570 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 ASIC3Q9UHC3 531 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 NAGPAQ9UK23 515 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 EXOC7Q9UPT5 735 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
TOP3A-217ENST00000584582 UTP11Q9Y3A2 253 aaKnown RBP12.24□□□□□ -0.45
TOP3A-217ENST00000584582 ANO9A1A5B4 782 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 WDR64B1ANS9 1081 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 KIAA0754O94854 1291 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SPDYE2Q495Y8 402 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 CCDC26Q8TAB7 109 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 BAP1Q92560 729 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 MAGOHBQ96A72 148 aaKnown RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 PAIP2Q9BPZ3 127 aaKnown RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 HEMGNQ9BXL5 484 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 HSPBP1Q9NZL4 362 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 COL16A1Q07092 1604 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 TBX3O15119 743 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 ONECUT3O60422 494 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 TRADDQ15628 312 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 MEA1Q16626 185 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 EDRF1Q3B7T1 1238 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SEL1L2Q5TEA6 688 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 USP37Q86T82 979 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SLC20A1Q8WUM9 679 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SLC35C1Q96A29 364 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 KCND1Q9NSA2 647 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 L1RE1Q9UN81 338 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SNX24Q9Y343 169 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 NHSL1Q5SYE7 1610 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 INO80B-WBP1J3KQ70 363 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 PGRMC1O00264 195 aaKnown RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 EDIL3O43854 480 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SETQ01105 290 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 BFSP1Q12934 665 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 THNSL1Q8IYQ7 743 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 ZSWIM2Q8NEG5 633 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 SYTL5Q8TDW5 730 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 DHX38Q92620 1227 aaKnown RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 NT5C1BQ96P26 610 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 TLR10Q9BXR5 811 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 INO80BQ9C086 356 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 AZI2Q9H6S1 392 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 AS3MTQ9HBK9 375 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 COL20A1Q9P218 1284 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 WRAP73Q9P2S5 460 aaPredicted RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 NXF1Q9UBU9 619 aaKnown RBP12.23□□□□□ -0.45
TOP3A-217ENST00000584582 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 PITPNM2Q9BZ72 1349 aa12.23□□□□□ -0.45
TOP3A-217ENST00000584582 DAPK3O43293 454 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 CSDE1O75534 798 aaKnown RBP12.22□□□□□ -0.45
TOP3A-217ENST00000584582 CCT5P48643 541 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 CLK2P49760 499 aaKnown RBP12.22□□□□□ -0.45
TOP3A-217ENST00000584582 PDCLQ13371 301 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 ZNF720Q7Z2F6 126 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 SLC35G2Q8TBE7 412 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 BCAS4Q8TDM0 211 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 SLC7A3Q8WY07 619 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 ATP6V0A1Q93050 837 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 RIPK3Q9Y572 518 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 SOX5P35711 763 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 PIK3CAP42336 1068 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 MGARPQ8TDB4 240 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 TRIM51Q9BSJ1 452 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 THAP2Q9H0W7 228 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 TUFT1Q9NNX1 390 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 C1orf112Q9NSG2 853 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 TSKSQ9UJT2 592 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 BZW2Q9Y6E2 419 aaKnown RBP12.22□□□□□ -0.45
TOP3A-217ENST00000584582 A0A1W2PQJ5 194 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 K7ERI5 159 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 ICAM1P05362 532 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 LMNB1P20700 586 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 CCND2P30279 289 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 PDE6CP51160 858 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 TFAMQ00059 246 aaKnown RBP12.22□□□□□ -0.45
TOP3A-217ENST00000584582 Q4G0T1 1027 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 CCNI2Q6ZMN8 369 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-217ENST00000584582 WNK4Q96J92 1243 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 KCTD10Q9H3F6 313 aa12.22□□□□□ -0.45
TOP3A-217ENST00000584582 SSU72P8A0A1W2PR75 194 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 ZRANB2O95218 330 aaKnown RBP eCLIP12.21□□□□□ -0.45
TOP3A-217ENST00000584582 IFNB1P01574 187 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 GLI1P08151 1106 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 ITGA4P13612 1032 aa12.21□□□□□ -0.45
TOP3A-217ENST00000584582 MTM1Q13496 603 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms