RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 SLC24A5Q71RS6 500 aa27.66■■■□□ 2.02
TTC39C-209ENST00000584250 RNF149Q8NC42 400 aa27.66■■■□□ 2.02
TTC39C-209ENST00000584250 TGS1Q96RS0 853 aaKnown RBP27.66■■■□□ 2.02
TTC39C-209ENST00000584250 POLR3FQ9H1D9 316 aaPredicted RBP27.66■■■□□ 2.02
TTC39C-209ENST00000584250 LPXNO60711 386 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 IGFBP4P22692 258 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 GLRA2P23416 452 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 FAM189BP81408 668 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 CDC42EP1Q00587 391 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 CAPSQ13938 189 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 PAN2Q504Q3 1202 aaKnown RBP27.65■■■□□ 2.02
TTC39C-209ENST00000584250 PADI6Q6TGC4 694 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 GDPD5Q8WTR4 605 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 PNMA5Q96PV4 448 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 PLIN2Q99541 437 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 RAB34Q9BZG1 259 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 BHMT2Q9H2M3 363 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 ADGRA3Q8IWK6 1321 aa27.65■■■□□ 2.02
TTC39C-209ENST00000584250 PTPAQ15257 358 aa27.64■■■□□ 2.02
TTC39C-209ENST00000584250 FAM102BQ5T8I3 360 aa27.64■■■□□ 2.02
TTC39C-209ENST00000584250 FOXD4L5Q5VV16 416 aaPredicted RBP27.64■■■□□ 2.02
TTC39C-209ENST00000584250 KRT79Q5XKE5 535 aa27.64■■■□□ 2.02
TTC39C-209ENST00000584250 ARL6IP4Q66PJ3 421 aaKnown RBP27.64■■■□□ 2.02
TTC39C-209ENST00000584250 MAFAQ8NHW3 353 aaPredicted RBP27.64■■■□□ 2.02
TTC39C-209ENST00000584250 FOXD4L4Q8WXT5 416 aaPredicted RBP27.64■■■□□ 2.02
TTC39C-209ENST00000584250 GAS2L1Q99501 681 aaPredicted RBP27.64■■■□□ 2.02
TTC39C-209ENST00000584250 C1orf112Q9NSG2 853 aa27.64■■■□□ 2.02
TTC39C-209ENST00000584250 EYSQ5T1H1 3165 aa27.64■■■□□ 2.01
TTC39C-209ENST00000584250 NLRC5Q86WI3 1866 aa27.64■■■□□ 2.01
TTC39C-209ENST00000584250 ARHGEF35A5YM69 484 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 FGFR1P11362 822 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 MUTP22033 750 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 CEBPZQ03701 1054 aaKnown RBP27.63■■■□□ 2.01
TTC39C-209ENST00000584250 GRB10Q13322 594 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 ZRSR1Q15695 479 aaKnown RBP27.63■■■□□ 2.01
TTC39C-209ENST00000584250 CATSPER4Q7RTX7 472 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 BSNDQ8WZ55 320 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 RNF19AQ9NV58 838 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 HCSTQ9UBK5 93 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 LRFN2Q9ULH4 789 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 PCDHB7Q9Y5E2 793 aa27.63■■■□□ 2.01
TTC39C-209ENST00000584250 PRRC2BQ5JSZ5 2229 aaKnown RBP27.63■■■□□ 2.01
TTC39C-209ENST00000584250 FNDC1Q4ZHG4 1894 aaPredicted RBP27.62■■■□□ 2.01
TTC39C-209ENST00000584250 STAG3L1P0CL83 205 aa27.62■■■□□ 2.01
TTC39C-209ENST00000584250 ZSCAN20P17040 1043 aaPredicted RBP27.62■■■□□ 2.01
TTC39C-209ENST00000584250 SFPQP23246 707 aaKnown RBP eCLIP27.62■■■□□ 2.01
TTC39C-209ENST00000584250 BTG3Q14201 252 aaPredicted RBP27.62■■■□□ 2.01
TTC39C-209ENST00000584250 FIBCD1Q8N539 461 aa27.62■■■□□ 2.01
TTC39C-209ENST00000584250 ASAP2O43150 1006 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 HSP90AA1P07900 732 aaKnown RBP27.61■■■□□ 2.01
TTC39C-209ENST00000584250 ATF7P17544 494 aaPredicted RBP27.61■■■□□ 2.01
TTC39C-209ENST00000584250 CYP11B2P19099 503 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 PTENP60484 403 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 PKP1Q13835 747 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 MXD4Q14582 209 aaPredicted RBP27.61■■■□□ 2.01
TTC39C-209ENST00000584250 EPC2Q52LR7 807 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 SRGAP1Q7Z6B7 1085 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 ECHDC2Q86YB7 292 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 LRRC15Q8TF66 581 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 USP28Q96RU2 1077 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 INO80BQ9C086 356 aaPredicted RBP27.61■■■□□ 2.01
TTC39C-209ENST00000584250 PIN4Q9Y237 131 aaKnown RBP27.61■■■□□ 2.01
TTC39C-209ENST00000584250 MRPL42Q9Y6G3 142 aaKnown RBP27.61■■■□□ 2.01
TTC39C-209ENST00000584250 KIAA1671Q9BY89 1806 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 TRANK1O15050 2925 aa27.61■■■□□ 2.01
TTC39C-209ENST00000584250 MARCKSP29966 332 aaPredicted RBP27.6■■■□□ 2.01
TTC39C-209ENST00000584250 TMEM192Q8IY95 271 aa27.6■■■□□ 2.01
TTC39C-209ENST00000584250 PPM1EQ8WY54 764 aa27.6■■■□□ 2.01
TTC39C-209ENST00000584250 TMEM161AQ9NX61 479 aa27.6■■■□□ 2.01
TTC39C-209ENST00000584250 EYA4O95677 639 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 HOXA11P31270 313 aaPredicted RBP27.59■■■□□ 2.01
TTC39C-209ENST00000584250 PHKA2P46019 1235 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 CCDC85BQ15834 202 aaPredicted RBP27.59■■■□□ 2.01
TTC39C-209ENST00000584250 LONRF3Q496Y0 759 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 HYIQ5T013 277 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 ZNF598Q86UK7 904 aaKnown RBP27.59■■■□□ 2.01
TTC39C-209ENST00000584250 RNF169Q8NCN4 708 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 MCPH1Q8NEM0 835 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 FBXO22Q8NEZ5 403 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 RUSC1Q9BVN2 902 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 AGPAT5Q9NUQ2 364 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 MTCH2Q9Y6C9 303 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 STK24Q9Y6E0 443 aa27.59■■■□□ 2.01
TTC39C-209ENST00000584250 MEIS3P2A8K0S8 358 aa27.58■■■□□ 2.01
TTC39C-209ENST00000584250 BMP15O95972 392 aa27.58■■■□□ 2.01
TTC39C-209ENST00000584250 MBTD1Q05BQ5 628 aa27.58■■■□□ 2.01
TTC39C-209ENST00000584250 SPECC1Q5M775 1068 aa27.58■■■□□ 2.01
TTC39C-209ENST00000584250 USP49Q70CQ1 688 aa27.58■■■□□ 2.01
TTC39C-209ENST00000584250 CABP7Q86V35 215 aa27.58■■■□□ 2.01
TTC39C-209ENST00000584250 IFNLR1Q8IU57 520 aaPredicted RBP27.58■■■□□ 2.01
TTC39C-209ENST00000584250 CMTR2Q8IYT2 770 aaKnown RBP27.58■■■□□ 2.01
TTC39C-209ENST00000584250 ELAC1Q9H777 363 aaKnown RBP27.58■■■□□ 2.01
TTC39C-209ENST00000584250 DNM3Q9UQ16 869 aa27.58■■■□□ 2.01
TTC39C-209ENST00000584250 MYH15Q9Y2K3 1946 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 A0A0U1RQF3 1178 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 TBKBP1A7MCY6 615 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 INO80B-WBP1J3KQ70 363 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 TFDP1Q14186 410 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 AMHR2Q16671 573 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 TMEM119Q4V9L6 283 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms