RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 GUCY1A3Q02108 690 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CCDC40Q4G0X9 1142 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 HAUS3Q68CZ6 603 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SVIPQ8NHG7 77 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ACER1Q8TDN7 264 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RAD54LQ92698 747 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 AK8Q96MA6 479 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CCDC43Q96MW1 224 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RUFY1Q96T51 708 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 KRT12Q99456 494 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CAPS2Q9BXY5 557 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RPAP3Q9H6T3 665 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ADAMTS1Q9UHI8 967 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 DDX25Q9UHL0 483 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 SIK3Q9Y2K2 1263 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 COL4A5P29400 1685 aa12.59□□□□□ -0.39
CDK5RAP3-231ENST00000584063 LAD1O00515 517 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 PALMO75781 387 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ACTN1P12814 892 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 HPDP32754 393 aaPredicted RBP12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 RAPGEF1Q13905 1077 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 CENPPQ6IPU0 288 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 DDX42Q86XP3 938 aaKnown RBP eCLIP12.58□□□□□ -0.396e-10■□□□□ 8.4
CDK5RAP3-231ENST00000584063 OR2W6PQ8NHA6 318 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 GIMAP1Q8WWP7 306 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 TLR10Q9BXR5 811 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 FAM184BQ9ULE4 1060 aa12.58□□□□□ -0.39
CDK5RAP3-231ENST00000584063 AARSP49588 968 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PRKG1Q13976 671 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SLMAPQ14BN4 828 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 LRRC55Q6ZSA7 311 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TMEM179Q6ZVK1 233 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 EHBP1Q8NDI1 1231 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TRIM58Q8NG06 486 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 AENQ8WTP8 325 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TBC1D5Q92609 795 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FAXDC2Q96IV6 333 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ZIM3Q96PE6 472 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 GMLQ99445 158 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 INTUQ9ULD6 942 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PLAGL2Q9UPG8 496 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 A0A1W2PRG0 241 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 B3GALNT1O75752 331 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 AP1G2O75843 785 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 RFX1P22670 979 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KLRC1P26715 233 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SEC24CP53992 1094 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KCNMA1Q12791 1236 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PDXDC1Q6P996 788 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CCBE1Q6UXH8 406 aaPredicted RBP12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PACS1Q6VY07 963 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 UNC13DQ70J99 1090 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SIAH1Q8IUQ4 282 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 FAM133AQ8N9E0 248 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 LSM14BQ9BX40 385 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KIAA1024Q9UPX6 916 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PCDHA1Q9Y5I3 950 aa12.58□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MYO3BQ8WXR4 1341 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ENTPD3O75355 529 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 HEXIM1O94992 359 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PYGLP06737 847 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PAFAH1B1P43034 410 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 MAGEA9P43362 315 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 GMPSP49915 693 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CORO7P57737 925 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 PSMC6P62333 389 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 COASYQ13057 564 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 JAZF1Q86VZ6 243 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 DRAXINQ8NBI3 349 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 DNAJC19Q96DA6 116 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 HYOU1Q9Y4L1 999 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 EIF3FO00303 357 aaPredicted RBP12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 SLC26A4O43511 780 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 TLR2O60603 784 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NDUFB10O96000 172 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 CASP5P51878 434 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KRT79Q5XKE5 535 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 UNC5DQ6UXZ4 953 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 NEK10Q6ZWH5 1172 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 RBM12BQ8IXT5 1001 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 KAT2BQ92831 832 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
CDK5RAP3-231ENST00000584063 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms