RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 LETM1O95202 739 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-207ENST00000583965 GLRA2P23416 452 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 SMTNP53814 917 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-207ENST00000583965 EHHADHQ08426 723 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 DRP2Q13474 957 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 BFSP2Q13515 415 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 LRRC26Q2I0M4 334 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 TRIM60Q495X7 471 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 HERC4Q5GLZ8 1057 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-207ENST00000583965 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 RHPN2Q8IUC4 686 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 FAM178BQ8IXR5 827 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 MYCT1Q8N699 235 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 ASAP3Q8TDY4 903 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 NTPCRQ9BSD7 190 aaKnown RBP12.88□□□□□ -0.35
CDRT1-207ENST00000583965 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 FAM49AQ9H0Q0 323 aaPredicted RBP12.88□□□□□ -0.35
CDRT1-207ENST00000583965 ZHX3Q9H4I2 956 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
CDRT1-207ENST00000583965 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 VTNP04004 478 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 NPTX2P47972 431 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 GPC3P51654 580 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 EFNA5P52803 228 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 PEX3P56589 373 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 MRPS6P82932 125 aaKnown RBP12.87□□□□□ -0.35
CDRT1-207ENST00000583965 TLE2Q04725 743 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 ALCAMQ13740 583 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 CAPSQ13938 189 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 TRIM71Q2Q1W2 868 aaKnown RBP12.87□□□□□ -0.35
CDRT1-207ENST00000583965 KMT5BQ4FZB7 885 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 FAM26FQ5R3K3 315 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
CDRT1-207ENST00000583965 TRIML1Q8N9V2 468 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 BSNDQ8WZ55 320 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
CDRT1-207ENST00000583965 KCNN1Q92952 543 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 C2orf40Q9H1Z8 148 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 ST6GALNAC4Q9H4F1 302 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 KMT5AQ9NQR1 393 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
CDRT1-207ENST00000583965 TET1Q8NFU7 2136 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 LRRIQ4A6NIV6 560 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 GPR32O75388 356 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 CLTBP09497 229 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 THPOP40225 353 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 PHKA2P46019 1235 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 CRYBB1P53674 252 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-207ENST00000583965 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 NLRP11P59045 1033 aaKnown RBP12.86□□□□□ -0.35
CDRT1-207ENST00000583965 ZNF445P59923 1031 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 FAAP100Q0VG06 881 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 GSE1Q14687 1217 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 FAM26DQ5JW98 314 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 CDCA2Q69YH5 1023 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-207ENST00000583965 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 SRGAP1Q7Z6B7 1085 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 ZBTB8OSQ8IWT0 167 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 DEPTORQ8TB45 409 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 NLRP7Q8WX94 980 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 ERCC4Q92889 916 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-207ENST00000583965 WNT8BQ93098 351 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 HVCN1Q96D96 273 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 HTATIP2Q9BUP3 242 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 CELF4Q9BZC1 486 aaKnown RBP12.86□□□□□ -0.35
CDRT1-207ENST00000583965 INO80BQ9C086 356 aaPredicted RBP12.86□□□□□ -0.35
CDRT1-207ENST00000583965 ADAMTS10Q9H324 1103 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
CDRT1-207ENST00000583965 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 ARHGAP28Q9P2N2 729 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 TRPV2Q9Y5S1 764 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 CITO14578 2027 aa12.86□□□□□ -0.35
CDRT1-207ENST00000583965 LTBP2Q14767 1821 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 MICAL3Q7RTP6 2002 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 K7ENM7 598 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 EIF3DO15371 548 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDRT1-207ENST00000583965 SLC16A4O15374 487 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 PARNO95453 639 aaKnown RBP12.85□□□□□ -0.35
CDRT1-207ENST00000583965 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 CKBP12277 381 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 PTENP60484 403 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 MGAT3Q09327 533 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 PCBP1Q15365 356 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDRT1-207ENST00000583965 KIZQ2M2Z5 673 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 ZNF658Q5TYW1 1059 aaPredicted RBP12.85□□□□□ -0.35
CDRT1-207ENST00000583965 ZNF720Q7Z2F6 126 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 KSR1Q8IVT5 923 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 TMEM161BQ8NDZ6 487 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 FIZ1Q96SL8 496 aa12.85□□□□□ -0.35
CDRT1-207ENST00000583965 GCOM2Q9BZD3 368 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms