RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 KYAT1Q16773 422 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 SHC4Q6S5L8 630 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.5■□□□□ 0.396e-7■■■■□ 24.5
ERBB2-214ENST00000583038 WNT8AQ9H1J5 351 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 ZWILCHQ9H900 591 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 ALKQ9UM73 1620 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 SDC4P31431 198 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 OSBPL9Q96SU4 736 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 UBE4BO95155 1302 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 DRAP1Q14919 205 aaPredicted RBP17.5■□□□□ 0.39
ERBB2-214ENST00000583038 SBK1Q52WX2 424 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 BANK1Q8NDB2 785 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 ZNF564Q8TBZ8 553 aaPredicted RBP17.5■□□□□ 0.39
ERBB2-214ENST00000583038 CFAP36Q96G28 342 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 FAM49AQ9H0Q0 323 aaPredicted RBP17.5■□□□□ 0.39
ERBB2-214ENST00000583038 ZNF302Q9NR11 478 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 IP6K2Q9UHH9 426 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 ZHX2Q9Y6X8 837 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
ERBB2-214ENST00000583038 SLC16A4O15374 487 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 FOXP2O15409 715 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 EYA4O95677 639 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 MARK3P27448 753 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 TAP1Q03518 808 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 RSBN1LQ6PCB5 846 aaPredicted RBP17.49■□□□□ 0.39
ERBB2-214ENST00000583038 ADGRF4Q8IZF3 695 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 RFFLQ8WZ73 363 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 RAVER2Q9HCJ3 691 aaKnown RBP17.49■□□□□ 0.39
ERBB2-214ENST00000583038 TUFT1Q9NNX1 390 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 SETSIPP0DME0 302 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 TTLL4Q14679 1199 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 PPP6R3Q5H9R7 873 aaPredicted RBP17.49■□□□□ 0.39
ERBB2-214ENST00000583038 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
ERBB2-214ENST00000583038 GNGT2O14610 69 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 SNAP25P60880 206 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 DEUP1Q05D60 604 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 WRNIP1Q96S55 665 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 FAM213AQ9BRX8 229 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 MRPL4Q9BYD3 311 aaKnown RBP17.49■□□□□ 0.39
ERBB2-214ENST00000583038 INTS2Q9H0H0 1204 aaKnown RBP17.49■□□□□ 0.39
ERBB2-214ENST00000583038 ACAD9Q9H845 621 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 CAPN11Q9UMQ6 739 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 RNF17Q9BXT8 1623 aaKnown RBP17.49■□□□□ 0.39
ERBB2-214ENST00000583038 KPNA7A9QM74 516 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 NMT2O60551 498 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 CASP1P29466 404 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 GPC3P51654 580 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 TMTC4Q5T4D3 741 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 KSR1Q8IVT5 923 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 RHOT1Q8IXI2 618 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 C11orf70Q9BRQ4 267 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 ADAM21Q9UKJ8 722 aa17.49■□□□□ 0.39
ERBB2-214ENST00000583038 LMNAP02545 664 aaKnown RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 MMEP08473 750 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 NFX1Q12986 1120 aaKnown RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 TSTA3Q13630 321 aaPredicted RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 ATG9AQ7Z3C6 839 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 SYT2Q8N9I0 419 aaPredicted RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 MYCBPQ99417 103 aaPredicted RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 MAGEB5Q9BZ81 275 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 UBN1Q9NPG3 1134 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 DDX56Q9NY93 547 aaKnown RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 SMIM24O75264 130 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 GUCY2CP25092 1073 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 CDO1Q16878 200 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 HSPH1Q92598 858 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 GCNAQ96QF7 691 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 KLHL8Q9P2G9 620 aaPredicted RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 FAF1Q9UNN5 650 aaPredicted RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 POTEFA5A3E0 1075 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 RASA4BC9J798 803 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 RASA4O43374 803 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 POTEIP0CG38 1075 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 EFNA5P52803 228 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 GPSM2P81274 684 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 FAM133BQ5BKY9 247 aaKnown RBP17.48■□□□□ 0.39
ERBB2-214ENST00000583038 KCNV1Q6PIU1 500 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 POTEGQ6S5H5 508 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 POTEEQ6S8J3 1075 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 KCTD17Q8N5Z5 321 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 LXNQ9BS40 222 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 LRRC7Q96NW7 1537 aa17.48■□□□□ 0.39
ERBB2-214ENST00000583038 NBPF26B4DH59 902 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 GFPT1Q06210 699 aaPredicted RBP17.47■□□□□ 0.39
ERBB2-214ENST00000583038 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
ERBB2-214ENST00000583038 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 LIMA1Q9UHB6 759 aaKnown RBP17.47■□□□□ 0.39
ERBB2-214ENST00000583038 ZDHHC9Q9Y397 364 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 PCDHA10Q9Y5I2 948 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 REREQ9P2R6 1566 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 TBX3O15119 743 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 CTIFO43310 598 aaKnown RBP17.47■□□□□ 0.39
ERBB2-214ENST00000583038 CRB1P82279 1406 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 TMPRSS15P98073 1019 aa17.47■□□□□ 0.39
ERBB2-214ENST00000583038 SF3B3Q15393 1217 aaKnown RBP17.47■□□□□ 0.39
ERBB2-214ENST00000583038 CEP55Q53EZ4 464 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms