RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 TEKT4Q8WW24 435 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 EPAS1Q99814 870 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 KCNQ5Q9NR82 932 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 ABCF3Q9NUQ8 709 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 TAS2R14Q9NYV8 317 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 GCNT4Q9P109 453 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 FGGP02679 453 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 ATP2A2P16615 1042 aaKnown RBP11.37□□□□□ -0.59
TOP3A-214ENST00000582981 NMT1P30419 496 aaKnown RBP11.37□□□□□ -0.59
TOP3A-214ENST00000582981 CYP2J2P51589 502 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 TNNC1P63316 161 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 CTTNQ14247 550 aaKnown RBP11.37□□□□□ -0.59
TOP3A-214ENST00000582981 SLMAPQ14BN4 828 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 QRICH1Q2TAL8 776 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 ARMC9Q7Z3E5 817 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 KLHL29Q96CT2 875 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 LZTS2Q9BRK4 669 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 KCTD10Q9H3F6 313 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 ACP6Q9NPH0 428 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 SWAP70Q9UH65 585 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 NAGPAQ9UK23 515 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
TOP3A-214ENST00000582981 MYH4Q9Y623 1939 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 IRS2Q9Y4H2 1338 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 MMEP08473 750 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 GHRP10912 638 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 PRLRP16471 622 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 ZNF543Q08ER8 600 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 SLC5A9Q2M3M2 681 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 EMC10Q5UCC4 262 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 IRF2BP2Q7Z5L9 587 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 CATSPER3Q86XQ3 398 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 SLC17A8Q8NDX2 589 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 P3H4Q92791 437 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 RUSC1Q9BVN2 902 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 ZNF287Q9HBT7 754 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 RIC8AQ9NPQ8 531 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 PICK1Q9NRD5 415 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 DNAJC17Q9NVM6 304 aaKnown RBP11.36□□□□□ -0.59
TOP3A-214ENST00000582981 SPDYE3A6NKU9 549 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 TISP43B9A030 160 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 MAP3K13O43283 966 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 UBOX5O94941 541 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 LUC7L3O95232 432 aaKnown RBP11.36□□□□□ -0.59
TOP3A-214ENST00000582981 SHBGP04278 402 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 FERP16591 822 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 PON1P27169 355 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 HOXD13P35453 343 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 CCDC38Q502W7 563 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 TRPM8Q7Z2W7 1104 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 FAM84AQ96KN4 292 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
TOP3A-214ENST00000582981 MLXIPLQ9NP71 852 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 GGA1Q9UJY5 639 aa11.36□□□□□ -0.59
TOP3A-214ENST00000582981 GPR75-ASB3A0A0A6YYF3 556 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 ATMINO43313 823 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 XRCC5P13010 732 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 NQO1P15559 274 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PPP4CP60510 307 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PPP1R15BQ5SWA1 713 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 RNF10Q8N5U6 811 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 KLHL23Q8NBE8 558 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 NAF1Q96HR8 494 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 ANO3Q9BYT9 981 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 TRIM4Q9C037 500 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 ECT2Q9H8V3 914 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 ERVK-5Q9HDB9 667 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PLCB1Q9NQ66 1216 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 LMCD1Q9NZU5 365 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 SMCHD1A6NHR9 2005 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 TTC36A6NLP5 189 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 DDX3XO00571 662 aaKnown RBP eCLIP11.35□□□□□ -0.592e-11■■■□□ 16.2
TOP3A-214ENST00000582981 KRT13P13646 458 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 HSPA9P38646 679 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 MARCKSL1P49006 195 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 ROR2Q01974 943 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 BIRC3Q13489 604 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 MFN1Q8IWA4 741 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 LRRC34Q8IZ02 419 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 MREGQ8N565 214 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 LRRC45Q96CN5 670 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PPP1R9AQ9ULJ8 1098 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 TRIM33Q9UPN9 1127 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 SNX24Q9Y343 169 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 C2CD2Q9Y426 696 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PCDHA2Q9Y5H9 948 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PNMA6FA0A0J9YX94 578 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 C5orf60A6NFR6 353 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 DDX39AO00148 427 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 RPS6KA4O75676 772 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PYGBP11216 843 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 CHN1P15882 459 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 CCND1P24385 295 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 TUBP50607 506 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 LACTBP83111 547 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms