RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 APBB2Q92870 758 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 CDK5RAP3Q96JB5 506 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 GDPD2Q9HCC8 539 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 CIZ1Q9ULV3 898 aaPredicted RBP18.22■□□□□ 0.51
RNF43-206ENST00000582293 ATP6V1DQ9Y5K8 247 aa18.22■□□□□ 0.51
RNF43-206ENST00000582293 GBF1Q92538 1859 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 NPHP3-ACAD11A0A0J9YXS1 232 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 ASAP2O43150 1006 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 SRGAP2CP0DJJ0 459 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 NCLP19338 710 aaKnown RBP18.21■□□□□ 0.51
RNF43-206ENST00000582293 CDC42EP1Q00587 391 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 DSC3Q14574 896 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 FAM102BQ5T8I3 360 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 IFNLR1Q8IU57 520 aaPredicted RBP18.21■□□□□ 0.51
RNF43-206ENST00000582293 RNF149Q8NC42 400 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 SPATA32Q96LK8 384 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 PANK2Q9BZ23 570 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 GCOM2Q9BZD3 368 aaPredicted RBP18.21■□□□□ 0.51
RNF43-206ENST00000582293 SLC4A7Q9Y6M7 1214 aa18.21■□□□□ 0.51
RNF43-206ENST00000582293 COL4A6Q14031 1691 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 ENPP3O14638 875 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 HIP1RO75146 1068 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 GUCY2CP25092 1073 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 ME1P48163 572 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 PTENP60484 403 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 POU5F1BQ06416 359 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 NFX1Q12986 1120 aaKnown RBP18.2■□□□□ 0.5
RNF43-206ENST00000582293 MXD4Q14582 209 aaPredicted RBP18.2■□□□□ 0.5
RNF43-206ENST00000582293 E2F4Q16254 413 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 RESP18Q5W5W9 173 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 CRIPAKQ8N1N5 446 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 LRCH3Q96II8 777 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 ADGRA3Q8IWK6 1321 aa18.2■□□□□ 0.5
RNF43-206ENST00000582293 GPR182O15218 404 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 SSBP05455 408 aaKnown RBP eCLIP18.19■□□□□ 0.5
RNF43-206ENST00000582293 PBX2P40425 430 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 CACNB1Q02641 598 aaPredicted RBP18.19■□□□□ 0.5
RNF43-206ENST00000582293 RAD51AP2Q09MP3 1159 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 AMHR2Q16671 573 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 RRAGBQ5VZM2 374 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 CDCA2Q69YH5 1023 aaPredicted RBP18.19■□□□□ 0.5
RNF43-206ENST00000582293 PDILTQ8N807 584 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 LARP4BQ92615 738 aaKnown RBP18.19■□□□□ 0.5
RNF43-206ENST00000582293 SCLT1Q96NL6 688 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 MTIF3Q9H2K0 278 aaKnown RBP18.19■□□□□ 0.5
RNF43-206ENST00000582293 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 CCDC39Q9UFE4 941 aa18.19■□□□□ 0.5
RNF43-206ENST00000582293 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.18■□□□□ 0.5
RNF43-206ENST00000582293 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.18■□□□□ 0.5
RNF43-206ENST00000582293 EFCAB14O75071 495 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
RNF43-206ENST00000582293 FXR1P51114 621 aaKnown RBP eCLIP18.18■□□□□ 0.5
RNF43-206ENST00000582293 RABGGTBP53611 331 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 MBTD1Q05BQ5 628 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 DHX8Q14562 1220 aaKnown RBP18.18■□□□□ 0.5
RNF43-206ENST00000582293 SRGAP1Q7Z6B7 1085 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 GPBP1Q86WP2 473 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 RASSF8Q8NHQ8 419 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 PHOSPHO2Q8TCD6 241 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 SLC9A7Q96T83 725 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 KIFC3Q9BVG8 833 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 NFKBIZQ9BYH8 718 aa18.18■□□□□ 0.5
RNF43-206ENST00000582293 SCAND2PQ9GZW5 306 aaPredicted RBP18.18■□□□□ 0.5
RNF43-206ENST00000582293 TSPYL2Q9H2G4 693 aaPredicted RBP18.18■□□□□ 0.5
RNF43-206ENST00000582293 SFI1A8K8P3 1242 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 EDN1P05305 212 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 MYOGP15173 224 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 TXLNAP40222 546 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 NAMPTP43490 491 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 PHKA2P46019 1235 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 KCNJ6P48051 423 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 SMAD3P84022 425 aaKnown RBP18.17■□□□□ 0.5
RNF43-206ENST00000582293 GIT2Q14161 759 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 ADALQ6DHV7 355 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 CCDC73Q6ZRK6 1079 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 HERC6Q8IVU3 1022 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 KIFAP3Q92845 792 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 TOP1MTQ969P6 601 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 ADAM2Q99965 735 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 REEP2Q9BRK0 252 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 FTHL17Q9BXU8 183 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 PBX4Q9BYU1 374 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 RGS18Q9NS28 235 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 KCND2Q9NZV8 630 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 CHMP5Q9NZZ3 219 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 HPSEQ9Y251 543 aa18.17■□□□□ 0.5
RNF43-206ENST00000582293 YBX2Q9Y2T7 364 aaKnown RBP18.17■□□□□ 0.5
RNF43-206ENST00000582293 MYMKA6NI61 221 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 LRRIQ4A6NIV6 560 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 TTLL13PA6NNM8 815 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 C9IYK1 514 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 ARHGEF15O94989 841 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 HOXA11P31270 313 aaPredicted RBP18.16■□□□□ 0.5
RNF43-206ENST00000582293 STAT6P42226 847 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 TFDP1Q14186 410 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 MYOCDQ8IZQ8 938 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 IPO9Q96P70 1041 aaKnown RBP18.16■□□□□ 0.5
RNF43-206ENST00000582293 TIPINQ9BVW5 301 aa18.16■□□□□ 0.5
RNF43-206ENST00000582293 INO80BQ9C086 356 aaPredicted RBP18.16■□□□□ 0.5
RNF43-206ENST00000582293 CCDC113Q9H0I3 377 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms