RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 MYCT1Q8N699 235 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 ASAP3Q8TDY4 903 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 DNAJB3Q8WWF6 145 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
GGA3-211ENST00000582232 IFT74Q96LB3 600 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 TRPV6Q9H1D0 765 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 ST6GALNAC4Q9H4F1 302 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 POLD4Q9HCU8 107 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 EXOC1Q9NV70 894 aa12.72□□□□□ -0.37
GGA3-211ENST00000582232 DCDC2CA8MYV0 355 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 GPR32O75388 356 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 NPTX2P47972 431 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 GPC3P51654 580 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 SMTNP53814 917 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 ATN1P54259 1190 aaPredicted RBP12.71□□□□□ -0.37
GGA3-211ENST00000582232 NCKAP1LP55160 1127 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 PEX3P56589 373 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 ALCAMQ13740 583 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 CAPSQ13938 189 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 MORC3Q14149 939 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 TFDP1Q14186 410 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 COBLL1Q53SF7 1204 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 FAM26DQ5JW98 314 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 CDCA2Q69YH5 1023 aaPredicted RBP12.71□□□□□ -0.37
GGA3-211ENST00000582232 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 SFR1Q86XK3 245 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 RHPN2Q8IUC4 686 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 CAGE1Q8TC20 777 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 DHX38Q92620 1227 aaKnown RBP12.71□□□□□ -0.37
GGA3-211ENST00000582232 STRA6Q9BX79 667 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 ADAMTS10Q9H324 1103 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 MAN1B1Q9UKM7 699 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 NOD1Q9Y239 953 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 AKT3Q9Y243 479 aa12.71□□□□□ -0.37
GGA3-211ENST00000582232 SIP14410 1827 aa12.71□□□□□ -0.38
GGA3-211ENST00000582232 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 H0YCG3 227 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 PPP1R37O75864 691 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 VTNP04004 478 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 NLRP11P59045 1033 aaKnown RBP12.7□□□□□ -0.38
GGA3-211ENST00000582232 PTENP60484 403 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 MRPS6P82932 125 aaKnown RBP12.7□□□□□ -0.38
GGA3-211ENST00000582232 TLE2Q04725 743 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 FAAP100Q0VG06 881 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 TRIM60Q495X7 471 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 ZNF658Q5TYW1 1059 aaPredicted RBP12.7□□□□□ -0.38
GGA3-211ENST00000582232 EPM2AIP1Q7L775 607 aaPredicted RBP12.7□□□□□ -0.38
GGA3-211ENST00000582232 KSR1Q8IVT5 923 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 TMEM161BQ8NDZ6 487 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 WNT8BQ93098 351 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 FAM49AQ9H0Q0 323 aaPredicted RBP12.7□□□□□ -0.38
GGA3-211ENST00000582232 C2orf40Q9H1Z8 148 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 ZHX3Q9H4I2 956 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 IFT122Q9HBG6 1241 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 KMT5AQ9NQR1 393 aa12.7□□□□□ -0.38
GGA3-211ENST00000582232 MKI67P46013 3256 aaKnown RBP12.7□□□□□ -0.38
GGA3-211ENST00000582232 ADGRA3Q8IWK6 1321 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 ALPK3Q96L96 1907 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 CCDC85CA6NKD9 419 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 EIF3DO15371 548 aaKnown RBP eCLIP12.69□□□□□ -0.38
GGA3-211ENST00000582232 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
GGA3-211ENST00000582232 BMP6P22004 513 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 PHKA2P46019 1235 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 EFNA5P52803 228 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 CRYBB1P53674 252 aaPredicted RBP12.69□□□□□ -0.38
GGA3-211ENST00000582232 GTF2BQ00403 316 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 MGAT3Q09327 533 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 STK4Q13043 487 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 BFSP2Q13515 415 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 PCBP1Q15365 356 aaKnown RBP eCLIP12.69□□□□□ -0.38
GGA3-211ENST00000582232 ZSCAN23Q3MJ62 389 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 HAUS6Q7Z4H7 955 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 SRGAP1Q7Z6B7 1085 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 CCDC155Q8N6L0 562 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 RNF149Q8NC42 400 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 KIAA0895Q8NCT3 520 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 HVCN1Q96D96 273 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 CELF4Q9BZC1 486 aaKnown RBP12.69□□□□□ -0.38
GGA3-211ENST00000582232 MRPL44Q9H9J2 332 aaKnown RBP12.69□□□□□ -0.38
GGA3-211ENST00000582232 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 SQORQ9Y6N5 450 aa12.69□□□□□ -0.38
GGA3-211ENST00000582232 UBE4BO95155 1302 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 A0A087WZ62 844 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 CCDC169A6NNP5 214 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 SLC16A4O15374 487 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 CHRNA1P02708 482 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 SRGAP2CP0DJJ0 459 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 CKBP12277 381 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 NMT1P30419 496 aaKnown RBP12.68□□□□□ -0.38
GGA3-211ENST00000582232 THPOP40225 353 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 PPP1R2P41236 205 aa12.68□□□□□ -0.38
GGA3-211ENST00000582232 NLRP12P59046 1061 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms