RNA–Protein interactions for RNA: ENST00000581733.1

TVP23B-209, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5 BASIC

Gene TVP23B, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-209ENST00000581733 DTNBO60941 627 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 RNGTTO60942 597 aaKnown RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 PLEKHA8P1O95397 391 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 KRT1P04264 644 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 CELA3AP09093 270 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 SCG2P13521 617 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 U2AF2P26368 475 aaKnown RBP eCLIP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 SMARCA1P28370 1054 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 SHMT1P34896 483 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 DEKP35659 375 aaKnown RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 KRT2P35908 639 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 ZNF445P59923 1031 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 CXCL9Q07325 125 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 TCP10Q12799 353 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 CERKLQ49MI3 558 aaPredicted RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 KRTAP5-3Q6L8H2 238 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 CCDC73Q6ZRK6 1079 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 TMEM179Q6ZVK1 233 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 FAM83AQ86UY5 434 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 RELL1Q8IUW5 271 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 PHC3Q8NDX5 983 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 BICD2Q8TD16 824 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 FAM151AQ8WW52 585 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 WDR89Q96FK6 387 aaPredicted RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 CEP95Q96GE4 821 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 TMEM74Q96NL1 305 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 FANCD2OSQ96PS1 177 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 SPZ1Q9BXG8 430 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 TDRD3Q9H7E2 651 aaKnown RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 CABP5Q9NP86 173 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 DDX19AQ9NUU7 478 aaKnown RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 MTMR4Q9NYA4 1195 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 ZNF70Q9UC06 446 aaPredicted RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 SEC63Q9UGP8 760 aaKnown RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 GPN3Q9UHW5 284 aaPredicted RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 RCOR1Q9UKL0 485 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 NOL7Q9UMY1 257 aaKnown RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 CEP131Q9UPN4 1083 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.4□□□□□ -1.22
TVP23B-209ENST00000581733 SAMM50Q9Y512 469 aa7.4□□□□□ -1.22
TVP23B-209ENST00000581733 LOXHD1Q8IVV2 1947 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 SCN4AP35499 1836 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 IGKV6D-41A0A0C4DH26 115 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 BMP15O95972 392 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 GLI1P08151 1106 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 AKR1B1P15121 316 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 AFMP43652 599 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 ME1P48163 572 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 NOVP48745 357 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 NASPP49321 788 aaPredicted RBP7.39□□□□□ -1.23
TVP23B-209ENST00000581733 LIG3P49916 1009 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 RACK1P63244 317 aaKnown RBP7.39□□□□□ -1.23
TVP23B-209ENST00000581733 PFKFB3Q16875 520 aaPredicted RBP7.39□□□□□ -1.23
TVP23B-209ENST00000581733 ZSCAN23Q3MJ62 389 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 ZNF394Q53GI3 561 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 RILPL1Q5EBL4 403 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 GPATCH4Q5T3I0 446 aaKnown RBP7.39□□□□□ -1.23
TVP23B-209ENST00000581733 SCARA3Q6AZY7 606 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 OTUD7BQ6GQQ9 843 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 GALNT17Q6IS24 598 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 FAM173BQ6P4H8 233 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 AGMOQ6ZNB7 445 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 DIS3L2Q8IYB7 885 aaKnown RBP7.39□□□□□ -1.23
TVP23B-209ENST00000581733 DPF2Q92785 391 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 RRP36Q96EU6 259 aaKnown RBP7.39□□□□□ -1.23
TVP23B-209ENST00000581733 CHAMP1Q96JM3 812 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 KANSL2Q9H9L4 492 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 KBTBD4Q9NVX7 518 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 NYAP2Q9P242 653 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 MAD2L2Q9UI95 211 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 SYNPO2Q9UMS6 1093 aa7.39□□□□□ -1.23
TVP23B-209ENST00000581733 PHIPQ8WWQ0 1821 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 DDTLA6NHG4 134 aaPredicted RBP7.38□□□□□ -1.23
TVP23B-209ENST00000581733 KIF28PB7ZC32 967 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 TCP10L2B9ZVM9 353 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 KLRF2D3W0D1 207 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 SPTLC2O15270 562 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 PAGE1O75459 146 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 BMP6P22004 513 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 NME2P22392 152 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 MRE11P49959 708 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 CACNB3P54284 484 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 NLRP5P59047 1200 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 ZNF280AP59817 542 aaPredicted RBP7.38□□□□□ -1.23
TVP23B-209ENST00000581733 ID3Q02535 119 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 CEBPZQ03701 1054 aaKnown RBP7.38□□□□□ -1.23
TVP23B-209ENST00000581733 AP3B2Q13367 1082 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 ABCB5Q2M3G0 1257 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 ANO1Q5XXA6 986 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 LRSAM1Q6UWE0 723 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 SRBD1Q8N5C6 995 aaKnown RBP7.38□□□□□ -1.23
TVP23B-209ENST00000581733 TOP6BLQ8N6T0 577 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 DCAF4Q8WV16 495 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 MRPS27Q92552 414 aaKnown RBP7.38□□□□□ -1.23
TVP23B-209ENST00000581733 HOOK2Q96ED9 719 aa7.38□□□□□ -1.23
TVP23B-209ENST00000581733 PRMT6Q96LA8 375 aaPredicted RBP7.38□□□□□ -1.23
TVP23B-209ENST00000581733 AIFM3Q96NN9 605 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms