RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 PCDHA6Q9UN73 950 aa15.77■□□□□ 0.12
CSNK1D-219ENST00000581660 PCDHA8Q9Y5H6 950 aa15.77■□□□□ 0.12
CSNK1D-219ENST00000581660 PATJQ8NI35 1801 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 SPDYE4A6NLX3 237 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 ANHXE9PGG2 379 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 IFIT3O14879 490 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 LILRB3O75022 631 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 LILRB5O75023 590 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 ZC3H11AO75152 810 aaKnown RBP eCLIP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 EIF4BP23588 611 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 GBP2P32456 591 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 UBE2SQ16763 222 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 CCDC60Q8IWA6 550 aaPredicted RBP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 LINC01465Q8N7H1 131 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 NELL1Q92832 810 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 MYADMQ96S97 322 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 FOXQ1Q9C009 403 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 AGO4Q9HCK5 861 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 SEC63Q9UGP8 760 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 SMG5Q9UPR3 1016 aaKnown RBP15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 MIA3Q5JRA6 1907 aa15.76■□□□□ 0.11
CSNK1D-219ENST00000581660 ERICH2A1L162 156 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 BACH1O14867 736 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 GALTP07902 379 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 CNPP09543 421 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 ATP4AP20648 1035 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 KLRC2P26717 231 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 HTR4Q13639 388 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 CATIPQ7Z7H3 387 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 LZTS2Q9BRK4 669 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 DDX23Q9BUQ8 820 aaKnown RBP15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 TRAIPQ9BWF2 469 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 DIAPH3Q9NSV4 1193 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 DACT1Q9NYF0 836 aa15.75■□□□□ 0.11
CSNK1D-219ENST00000581660 LRRN2O75325 713 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 NLRP11P59045 1033 aaKnown RBP15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 TRDNQ13061 729 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 CEP55Q53EZ4 464 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 PDXDC2PQ6P474 469 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 METTL13Q8N6R0 699 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 ATRIPQ8WXE1 791 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 BBXQ8WY36 941 aaPredicted RBP15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 SHDQ96IW2 340 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 NRDE2Q9H7Z3 1164 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 ZNF302Q9NR11 478 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 MAN1C1Q9NR34 630 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 TBC1D13Q9NVG8 400 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 ZSCAN32Q9NX65 697 aa15.74■□□□□ 0.11
CSNK1D-219ENST00000581660 HIP1O00291 1037 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 MEIS1O00470 390 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 MAGEB2O15479 319 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 LAMTOR5O43504 91 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 TBC1D4O60343 1298 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 LAMP2P13473 410 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 DARSP14868 501 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 MAGEA9P43362 315 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 CLCN3P51790 818 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 SART3Q15020 963 aaKnown RBP15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 TEX2Q8IWB9 1127 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 MAP7D2Q96T17 732 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 BCO2Q9BYV7 579 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 OSBPL6Q9BZF3 934 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 PARD6AQ9NPB6 346 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 SPATA6Q9NWH7 488 aaPredicted RBP15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.73■□□□□ 0.117e-8■■■■■ 49.6
CSNK1D-219ENST00000581660 DPP7Q9UHL4 492 aa15.73■□□□□ 0.11
CSNK1D-219ENST00000581660 CCDC195A0A1B0GUA6 201 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 KANSL1LA0AUZ9 987 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 DDAH1O94760 285 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 KIF5BP33176 963 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 PHKA2P46019 1235 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 SLC11A1P49279 550 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 COL9A2Q14055 689 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 PPM1JQ5JR12 505 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 MIS18BP1Q6P0N0 1132 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 ELMSAN1Q6PJG2 1045 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 GLB1LQ6UWU2 654 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 ZNF707Q96C28 371 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 CHAMP1Q96JM3 812 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 CHST12Q9NRB3 414 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 USP18Q9UMW8 372 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 CEP131Q9UPN4 1083 aa15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 MAFBQ9Y5Q3 323 aaPredicted RBP15.72■□□□□ 0.11
CSNK1D-219ENST00000581660 SLC30A4O14863 429 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 INPPL1O15357 1258 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 DHX15O43143 795 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 GPC3P51654 580 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 CSTF1Q05048 431 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 NOMO2Q5JPE7 1267 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 SWSAP1Q6NVH7 229 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 NIPA1Q7RTP0 329 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 NETO1Q8TDF5 533 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 LY9Q9HBG7 655 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 MRPL17Q9NRX2 175 aaKnown RBP15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 DNAJB4Q9UDY4 337 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 AKT3Q9Y243 479 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 NUMBLQ9Y6R0 609 aa15.71■□□□□ 0.11
CSNK1D-219ENST00000581660 MYH9P35579 1960 aaKnown RBP15.71■□□□□ 0.1
CSNK1D-219ENST00000581660 FRYQ5TBA9 3013 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms