RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 CNTNAP3BQ96NU0 1288 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 CNTNAP3Q9BZ76 1288 aa21.9■■□□□ 1.1
LIMD2-209ENST00000580222 IGKV6D-21A0A0A0MT36 114 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 MAFGO15525 162 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 NARSO43776 548 aaKnown RBP21.89■■□□□ 1.09
LIMD2-209ENST00000580222 LMNAP02545 664 aaKnown RBP21.89■■□□□ 1.09
LIMD2-209ENST00000580222 VTNP04004 478 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 ATP4AP20648 1035 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 PPM1AP35813 382 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 CRYBB1P53674 252 aaPredicted RBP21.89■■□□□ 1.09
LIMD2-209ENST00000580222 TMEM173Q86WV6 379 aaPredicted RBP21.89■■□□□ 1.09
LIMD2-209ENST00000580222 CCDC83Q8IWF9 413 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 DCLK2Q8N568 766 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 MXRA8Q9BRK3 442 aa21.89■■□□□ 1.09
LIMD2-209ENST00000580222 SEC63Q9UGP8 760 aaKnown RBP21.89■■□□□ 1.09
LIMD2-209ENST00000580222 TDGQ13569 410 aa21.88■■□□□ 1.09
LIMD2-209ENST00000580222 ECHDC2Q86YB7 292 aa21.88■■□□□ 1.09
LIMD2-209ENST00000580222 LRRC43Q8N309 656 aa21.88■■□□□ 1.09
LIMD2-209ENST00000580222 TNPO1Q92973 898 aaKnown RBP21.88■■□□□ 1.09
LIMD2-209ENST00000580222 KCNK12Q9HB15 430 aa21.88■■□□□ 1.09
LIMD2-209ENST00000580222 RNF216Q9NWF9 866 aaPredicted RBP21.88■■□□□ 1.09
LIMD2-209ENST00000580222 TPRP12270 2363 aaKnown RBP21.88■■□□□ 1.09
LIMD2-209ENST00000580222 NFASCO94856 1347 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 GPR179Q6PRD1 2367 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 CDKL5O76039 1030 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 IFNAR1P17181 557 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 CA8P35219 290 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 ABHD15Q6UXT9 468 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 HSCBQ8IWL3 235 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 RNF169Q8NCN4 708 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 RIN2Q8WYP3 895 aaPredicted RBP21.87■■□□□ 1.09
LIMD2-209ENST00000580222 TMX3Q96JJ7 454 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 RTP3Q9BQQ7 232 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 AGO4Q9HCK5 861 aaKnown RBP21.87■■□□□ 1.09
LIMD2-209ENST00000580222 DUSP12Q9UNI6 340 aa21.87■■□□□ 1.09
LIMD2-209ENST00000580222 KRBA1A5PL33 1030 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 HBP1O60381 514 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 C22orf31O95567 290 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 AKAP17AQ02040 695 aaKnown RBP21.86■■□□□ 1.09
LIMD2-209ENST00000580222 FUT2Q10981 343 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 NTRK3Q16288 839 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 FAM43BQ6ZT52 329 aaPredicted RBP21.86■■□□□ 1.09
LIMD2-209ENST00000580222 CCDC60Q8IWA6 550 aaPredicted RBP21.86■■□□□ 1.09
LIMD2-209ENST00000580222 VPS52Q8N1B4 723 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 BCL7CQ8WUZ0 217 aaPredicted RBP21.86■■□□□ 1.09
LIMD2-209ENST00000580222 PHKBQ93100 1093 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 PGBD1Q96JS3 809 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 SDF4Q9BRK5 362 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 SLC26A6Q9BXS9 759 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 ZBP1Q9H171 429 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 DLL3Q9NYJ7 618 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 FBXL21Q9UKT6 434 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 OTOGLQ3ZCN5 2332 aa21.86■■□□□ 1.09
LIMD2-209ENST00000580222 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.85■■□□□ 1.09
LIMD2-209ENST00000580222 N4BP1O75113 896 aaKnown RBP21.85■■□□□ 1.09
LIMD2-209ENST00000580222 BCAR1P56945 870 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 SSRP1Q08945 709 aaKnown RBP21.85■■□□□ 1.09
LIMD2-209ENST00000580222 ST3GAL1Q11201 340 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 PUM1Q14671 1186 aaKnown RBP eCLIP21.85■■□□□ 1.09
LIMD2-209ENST00000580222 ODR4Q5SWX8 454 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 ZNF598Q86UK7 904 aaKnown RBP21.85■■□□□ 1.09
LIMD2-209ENST00000580222 TRIM22Q8IYM9 498 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 HELQQ8TDG4 1101 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 RSAD2Q8WXG1 361 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 SNX21Q969T3 373 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 ZNF668Q96K58 619 aaPredicted RBP21.85■■□□□ 1.09
LIMD2-209ENST00000580222 RNF26Q9BY78 433 aaPredicted RBP21.85■■□□□ 1.09
LIMD2-209ENST00000580222 DZANK1Q9NVP4 752 aa21.85■■□□□ 1.09
LIMD2-209ENST00000580222 SPDYE3A6NKU9 549 aa21.84■■□□□ 1.09
LIMD2-209ENST00000580222 K7ELQ4 463 aaPredicted RBP21.84■■□□□ 1.09
LIMD2-209ENST00000580222 DDX39AO00148 427 aaKnown RBP21.84■■□□□ 1.09
LIMD2-209ENST00000580222 GPR149Q86SP6 731 aa21.84■■□□□ 1.09
LIMD2-209ENST00000580222 ABI1Q8IZP0 508 aa21.84■■□□□ 1.09
LIMD2-209ENST00000580222 ADAMTS10Q9H324 1103 aa21.84■■□□□ 1.09
LIMD2-209ENST00000580222 V9GY48 417 aaPredicted RBP21.84■■□□□ 1.09
LIMD2-209ENST00000580222 ACACBO00763 2458 aa21.84■■□□□ 1.09
LIMD2-209ENST00000580222 BACH1O14867 736 aa21.83■■□□□ 1.09
LIMD2-209ENST00000580222 HOXA2O43364 376 aa21.83■■□□□ 1.09
LIMD2-209ENST00000580222 CFHP08603 1231 aa21.83■■□□□ 1.09
LIMD2-209ENST00000580222 SLC26A2P50443 739 aa21.83■■□□□ 1.09
LIMD2-209ENST00000580222 ZNF484Q5JVG2 852 aa21.83■■□□□ 1.09
LIMD2-209ENST00000580222 VN1R3Q9BXE9 311 aa21.83■■□□□ 1.09
LIMD2-209ENST00000580222 SEMA4AQ9H3S1 761 aa21.83■■□□□ 1.09
LIMD2-209ENST00000580222 PRPF3O43395 683 aaKnown RBP21.82■■□□□ 1.08
LIMD2-209ENST00000580222 CTDNEP1O95476 244 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 FGFR4P22455 802 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 CLCN3P51790 818 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 SWSAP1Q6NVH7 229 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 PDXDC2PQ6P474 469 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 OTOP3Q7RTS5 596 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 TRMT1LQ7Z2T5 733 aaKnown RBP21.82■■□□□ 1.08
LIMD2-209ENST00000580222 CABP7Q86V35 215 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 METTL13Q8N6R0 699 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 NSUN7Q8NE18 718 aaKnown RBP21.82■■□□□ 1.08
LIMD2-209ENST00000580222 ACSF2Q96CM8 615 aaPredicted RBP21.82■■□□□ 1.08
LIMD2-209ENST00000580222 IRAK3Q9Y616 596 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 COL1A2P08123 1366 aa21.82■■□□□ 1.08
LIMD2-209ENST00000580222 STK36Q9NRP7 1315 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 SPTBN2O15020 2390 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 CFAP47Q6ZTR5 3102 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms