RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 MED15Q96RN5 788 aa15.3■□□□□ 0.04
TSEN54-206ENST00000579449 STRA6Q9BX79 667 aa15.3■□□□□ 0.04
TSEN54-206ENST00000579449 KMT5AQ9NQR1 393 aa15.3■□□□□ 0.04
TSEN54-206ENST00000579449 SUCLA2Q9P2R7 463 aaPredicted RBP15.3■□□□□ 0.04
TSEN54-206ENST00000579449 MBLAC1A4D2B0 266 aaPredicted RBP15.29■□□□□ 0.04
TSEN54-206ENST00000579449 MOXD2PA6NHM9 499 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 BECN2A8MW95 431 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.04
TSEN54-206ENST00000579449 PPP1R37O75864 691 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 CABYRO75952 493 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 KIF20AO95235 890 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 CCNE1P24864 410 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 HOXC8P31273 242 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 SMTNP53814 917 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 ZNF200P98182 395 aaPredicted RBP15.29■□□□□ 0.04
TSEN54-206ENST00000579449 PPP2R5AQ15172 486 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 ZC2HC1CQ53FD0 456 aaPredicted RBP15.29■□□□□ 0.04
TSEN54-206ENST00000579449 STXBP4Q6ZWJ1 553 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 KSR1Q8IVT5 923 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 ENOX1Q8TC92 643 aaKnown RBP15.29■□□□□ 0.04
TSEN54-206ENST00000579449 ZNF507Q8TCN5 953 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 PRPF31Q8WWY3 499 aaKnown RBP15.29■□□□□ 0.04
TSEN54-206ENST00000579449 P2RX5Q93086 422 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 VTI1AQ96AJ9 217 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 ZNF333Q96JL9 665 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 NTPCRQ9BSD7 190 aaKnown RBP15.29■□□□□ 0.04
TSEN54-206ENST00000579449 KIFC3Q9BVG8 833 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 SEMA6BQ9H3T3 888 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 ST6GALNAC4Q9H4F1 302 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 RWDD2AQ9UIY3 292 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 PCDHB13Q9Y5F0 798 aa15.29■□□□□ 0.04
TSEN54-206ENST00000579449 GRIN2DO15399 1336 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 UBE4BO95155 1302 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 ADGRA3Q8IWK6 1321 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 TRIM49BA6NDI0 452 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 SMTNL1A8MU46 457 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 KBTBD13C9JR72 458 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 IKBKBO14920 756 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 GJB1P08034 283 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 GNAT1P11488 350 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 TMOD1P28289 359 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 HOXD13P35453 343 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 NAMPTP43490 491 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 PMS1P54277 932 aaKnown RBP15.28■□□□□ 0.04
TSEN54-206ENST00000579449 GTF2BQ00403 316 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 MYL5Q02045 173 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 LAMTOR4Q0VGL1 99 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 ALCAMQ13740 583 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 CAPSQ13938 189 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 MXD4Q14582 209 aaPredicted RBP15.28■□□□□ 0.04
TSEN54-206ENST00000579449 NCAPHQ15003 741 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 BMT2Q1RMZ1 405 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 CENPPQ6IPU0 288 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 HAUS6Q7Z4H7 955 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 RHPN2Q8IUC4 686 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 TMEM161BQ8NDZ6 487 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 ARMC5Q96C12 935 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 GTF2IRD1Q9UHL9 959 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 KCNG1Q9UIX4 513 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 OGDHLQ9ULD0 1010 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 AKT3Q9Y243 479 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 SIP14410 1827 aa15.28■□□□□ 0.04
TSEN54-206ENST00000579449 BICDL2A1A5D9 508 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 ASAP2O43150 1006 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 TREHO43280 583 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 CYP2C9P11712 490 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 KCNA1Q09470 495 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 ITGA7Q13683 1181 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 KNOP1Q1ED39 458 aaKnown RBP15.27■□□□□ 0.04
TSEN54-206ENST00000579449 FAM47CQ5HY64 1035 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 SPATA1Q5VX52 437 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 ANKRD40Q6AI12 368 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 GDF6Q6KF10 455 aaPredicted RBP15.27■□□□□ 0.04
TSEN54-206ENST00000579449 TTI2Q6NXR4 508 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 RUFY4Q6ZNE9 571 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 SESTD1Q86VW0 696 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 KIAA0319LQ8IZA0 1049 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 DEPTORQ8TB45 409 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 MAP7D2Q96T17 732 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 KCTD10Q9H3F6 313 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 ARHGAP28Q9P2N2 729 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 PHF24Q9UPV7 400 aa15.27■□□□□ 0.04
TSEN54-206ENST00000579449 SMIM35A0A1B0GVV1 85 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 A0A1W2PQ45 241 aaPredicted RBP15.26■□□□□ 0.03
TSEN54-206ENST00000579449 A0A1W2PQY0 241 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 DENND3A2RUS2 1198 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 H0YCG3 227 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 GOLGA6L19H0YKK7 550 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 DNM1LO00429 736 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 VTNP04004 478 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 SRGAP2CP0DJJ0 459 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 TFDP1Q14186 410 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 RNF149Q8NC42 400 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 HVCN1Q96D96 273 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 ZNF668Q96K58 619 aaPredicted RBP15.26■□□□□ 0.03
TSEN54-206ENST00000579449 GLT1D1Q96MS3 346 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 ACCSQ96QU6 501 aa15.26■□□□□ 0.03
TSEN54-206ENST00000579449 DUSP9Q99956 384 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms