RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 ZNF668Q96K58 619 aaPredicted RBP12.74□□□□□ -0.37
GGA3-206ENST00000578773 PIGSQ96S52 555 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 SENP7Q9BQF6 1050 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 SMARCAD1Q9H4L7 1026 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
GGA3-206ENST00000578773 GIPC1O14908 333 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 ZBTB5O15062 677 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 VTNP04004 478 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 RETP07949 1114 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
GGA3-206ENST00000578773 KLRC1P26715 233 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 KLRC2P26717 231 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 ALX1Q15699 326 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 CSRP2Q16527 193 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 SOWAHCQ53LP3 525 aaPredicted RBP12.73□□□□□ -0.37
GGA3-206ENST00000578773 DDX53Q86TM3 631 aaKnown RBP12.73□□□□□ -0.37
GGA3-206ENST00000578773 ABI1Q8IZP0 508 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 IGSF21Q96ID5 467 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 WASF3Q9UPY6 502 aa12.73□□□□□ -0.37
GGA3-206ENST00000578773 MEIS3P2A8K0S8 358 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 LILRB3O75022 631 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 ITGB5P18084 799 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 FGFR4P22455 802 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 SLC44A4Q53GD3 710 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 IL31Q6EBC2 164 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 USP17L6PQ6QN14 398 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 ZNF598Q86UK7 904 aaKnown RBP12.72□□□□□ -0.37
GGA3-206ENST00000578773 ZNF589Q86UQ0 364 aaPredicted RBP12.72□□□□□ -0.37
GGA3-206ENST00000578773 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
GGA3-206ENST00000578773 SMG7Q92540 1137 aaKnown RBP12.72□□□□□ -0.37
GGA3-206ENST00000578773 LPPQ93052 612 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 MYL10Q9BUA6 226 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 NRDE2Q9H7Z3 1164 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
GGA3-206ENST00000578773 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
GGA3-206ENST00000578773 TDRD15B5MCY1 1934 aaKnown RBP12.71□□□□□ -0.37
GGA3-206ENST00000578773 A0A0D9SFI3 127 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 ZBTB42B2RXF5 422 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 C2CD2LO14523 706 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 GPR182O15218 404 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 HRO43593 1189 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 GPR32O75388 356 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 KCNK5O95279 499 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 SLC11A1P49279 550 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 ALDH7A1P49419 539 aaKnown RBP12.71□□□□□ -0.37
GGA3-206ENST00000578773 POLGP54098 1239 aaPredicted RBP12.71□□□□□ -0.37
GGA3-206ENST00000578773 FOXC1Q12948 553 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 PCNX4Q63HM2 1172 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 CMASQ8NFW8 434 aaPredicted RBP12.71□□□□□ -0.37
GGA3-206ENST00000578773 PIBF1Q8WXW3 757 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 GATA6Q92908 595 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 CLDN23Q96B33 292 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 FAM227BQ96M60 508 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 SMOC1Q9H4F8 434 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 MAD2L2Q9UI95 211 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 RAB23Q9ULC3 237 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 F5P12259 2224 aa12.71□□□□□ -0.37
GGA3-206ENST00000578773 KLRF2D3W0D1 207 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 CYTH3O43739 400 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 STAM2O75886 525 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
GGA3-206ENST00000578773 GALTP07902 379 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 NTHL1P78549 312 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 PSAPL1Q6NUJ1 521 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 MFSD6Q6ZSS7 791 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 TPRG1Q6ZUI0 275 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 TAS1R1Q7RTX1 841 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 NME8Q8N427 588 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 NXPE3Q969Y0 559 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 BORCS6Q96GS4 357 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 SHDQ96IW2 340 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 KXD1Q9BQD3 176 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 GBP3Q9H0R5 595 aa12.7□□□□□ -0.38
GGA3-206ENST00000578773 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
GGA3-206ENST00000578773 B4E1Z4 1266 aa12.69□□□□□ -0.38
GGA3-206ENST00000578773 HOXA2O43364 376 aa12.69□□□□□ -0.38
GGA3-206ENST00000578773 LRP3O75074 770 aa12.69□□□□□ -0.38
GGA3-206ENST00000578773 AASDHQ4L235 1098 aaPredicted RBP12.69□□□□□ -0.38
GGA3-206ENST00000578773 ZCCHC14Q8WYQ9 949 aaKnown RBP12.69□□□□□ -0.38
GGA3-206ENST00000578773 BBC3Q96PG8 261 aaPredicted RBP12.69□□□□□ -0.38
GGA3-206ENST00000578773 KIF26AQ9ULI4 1882 aaPredicted RBP12.69□□□□□ -0.38
GGA3-206ENST00000578773 CELSR3Q9NYQ7 3312 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 CHURC1-FNTBB4DL54 471 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 TEX28O15482 410 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 CSDE1O75534 798 aaKnown RBP12.68□□□□□ -0.38
GGA3-206ENST00000578773 FNTBP49356 437 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 CRYBB1P53674 252 aaPredicted RBP12.68□□□□□ -0.38
GGA3-206ENST00000578773 PRKCQQ04759 706 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 GIT2Q14161 759 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 SIM2Q14190 667 aaPredicted RBP12.68□□□□□ -0.38
GGA3-206ENST00000578773 ZBTB41Q5SVQ8 909 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.68□□□□□ -0.38
GGA3-206ENST00000578773 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 ZNF280BQ86YH2 543 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 ZNF687Q8N1G0 1237 aa12.68□□□□□ -0.38
GGA3-206ENST00000578773 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms