RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 NLRC5Q86WI3 1866 aa25.64■■□□□ 1.7
VAPA-205ENST00000578314 FGFR1P11362 822 aa25.64■■□□□ 1.7
VAPA-205ENST00000578314 XRCC6P12956 609 aaKnown RBP eCLIP25.64■■□□□ 1.78e-6■■□□□ 12.6
VAPA-205ENST00000578314 SFPQP23246 707 aaKnown RBP eCLIP25.64■■□□□ 1.78e-6■■■■□ 25.1
VAPA-205ENST00000578314 GNL2Q13823 731 aaKnown RBP25.64■■□□□ 1.7
VAPA-205ENST00000578314 TCP11Q8WWU5 503 aa25.64■■□□□ 1.7
VAPA-205ENST00000578314 PSPC1Q8WXF1 523 aaKnown RBP25.64■■□□□ 1.7
VAPA-205ENST00000578314 NLRP4Q96MN2 994 aa25.64■■□□□ 1.7
VAPA-205ENST00000578314 TRAIPQ9BWF2 469 aa25.64■■□□□ 1.7
VAPA-205ENST00000578314 NSUN3Q9H649 340 aaKnown RBP25.64■■□□□ 1.7
VAPA-205ENST00000578314 DACT1Q9NYF0 836 aa25.64■■□□□ 1.7
VAPA-205ENST00000578314 NCOR1O75376 2440 aa25.64■■□□□ 1.69
VAPA-205ENST00000578314 ASAP2O43150 1006 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 HOXA2O43364 376 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 CD2BP2O95400 341 aaKnown RBP25.63■■□□□ 1.69
VAPA-205ENST00000578314 EOMESO95936 686 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 MCM2P49736 904 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 EMC2Q15006 297 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 TTC38Q5R3I4 469 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 ZNF598Q86UK7 904 aaKnown RBP25.63■■□□□ 1.69
VAPA-205ENST00000578314 NECAB3Q96P71 396 aaPredicted RBP25.63■■□□□ 1.69
VAPA-205ENST00000578314 TMEM117Q9H0C3 514 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 RNF19AQ9NV58 838 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 RALGAPA2Q2PPJ7 1873 aa25.63■■□□□ 1.69
VAPA-205ENST00000578314 POTEMA6NI47 508 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 ITGB1P05556 798 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 OR52Z1P0C646 297 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 SPATA31C1P0DKV0 1188 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 LAMTOR4Q0VGL1 99 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 CAMK1Q14012 370 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 TCEAL5Q5H9L2 206 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 KLHL23Q8NBE8 558 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 SPPL3Q8TCT6 385 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 CASD1Q96PB1 797 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 UBE2ZQ9H832 354 aaPredicted RBP25.62■■□□□ 1.69
VAPA-205ENST00000578314 ALG13Q9NP73 1137 aaKnown RBP25.62■■□□□ 1.69
VAPA-205ENST00000578314 XPNPEP1Q9NQW7 623 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 TYW1Q9NV66 732 aaKnown RBP25.62■■□□□ 1.69
VAPA-205ENST00000578314 KIF3AQ9Y496 699 aa25.62■■□□□ 1.69
VAPA-205ENST00000578314 TECP42680 631 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 COL19A1Q14993 1142 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 SRGAP1Q7Z6B7 1085 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 FERMT3Q86UX7 667 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 C4orf32Q8N8J7 132 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 MTRQ99707 1265 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 CWH43Q9H720 699 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 TUFT1Q9NNX1 390 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 AAASQ9NRG9 546 aa25.61■■□□□ 1.69
VAPA-205ENST00000578314 NOL7Q9UMY1 257 aaKnown RBP25.61■■□□□ 1.69
VAPA-205ENST00000578314 DGAT1O75907 488 aa25.6■■□□□ 1.69
VAPA-205ENST00000578314 SRGAP2CP0DJJ0 459 aa25.6■■□□□ 1.69
VAPA-205ENST00000578314 RARRES1P49788 294 aa25.6■■□□□ 1.69
VAPA-205ENST00000578314 CATSPER4Q7RTX7 472 aa25.6■■□□□ 1.69
VAPA-205ENST00000578314 CATSPER3Q86XQ3 398 aa25.6■■□□□ 1.69
VAPA-205ENST00000578314 POLR3CQ9BUI4 534 aaPredicted RBP25.6■■□□□ 1.69
VAPA-205ENST00000578314 BMP2KQ9NSY1 1161 aaPredicted RBP25.6■■□□□ 1.69
VAPA-205ENST00000578314 PCDHB12Q9Y5F1 795 aa25.6■■□□□ 1.69
VAPA-205ENST00000578314 ATF7P17544 494 aaPredicted RBP25.59■■□□□ 1.69
VAPA-205ENST00000578314 DNAJB1P25685 340 aa25.59■■□□□ 1.69
VAPA-205ENST00000578314 TOB1P50616 345 aaPredicted RBP25.59■■□□□ 1.69
VAPA-205ENST00000578314 MXD4Q14582 209 aaPredicted RBP25.59■■□□□ 1.69
VAPA-205ENST00000578314 LRRC55Q6ZSA7 311 aa25.59■■□□□ 1.69
VAPA-205ENST00000578314 PIGOQ8TEQ8 1089 aa25.59■■□□□ 1.69
VAPA-205ENST00000578314 NCK2O43639 380 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 MED24O75448 989 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 SKIP12755 728 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 PHKA2P46019 1235 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 POU5F1BQ06416 359 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 CSPP1Q1MSJ5 1256 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 CLLU1OSQ5K130 101 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 SPOUT1Q5T280 376 aaKnown RBP25.58■■□□□ 1.69
VAPA-205ENST00000578314 ABI1Q8IZP0 508 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 PABPC5Q96DU9 382 aaKnown RBP25.58■■□□□ 1.69
VAPA-205ENST00000578314 MINDY3Q9H8M7 445 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 HCSTQ9UBK5 93 aa25.58■■□□□ 1.69
VAPA-205ENST00000578314 PIN4Q9Y237 131 aaKnown RBP25.58■■□□□ 1.69
VAPA-205ENST00000578314 BRWD1Q9NSI6 2320 aa25.58■■□□□ 1.68
VAPA-205ENST00000578314 A0A087WWV3 80 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 ZNF623O75123 536 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 LAG3P18627 525 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 RPA1P27694 616 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 ARL2P36404 184 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 FXR2P51116 673 aaKnown RBP eCLIP25.57■■□□□ 1.68
VAPA-205ENST00000578314 LEXMQ3ZCV2 418 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 TWF2Q6IBS0 349 aaKnown RBP25.57■■□□□ 1.68
VAPA-205ENST00000578314 COLGALT1Q8NBJ5 622 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 RNF149Q8NC42 400 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 RNF169Q8NCN4 708 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 ERMNQ8TAM6 284 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 POF1BQ8WVV4 589 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 NACC1Q96RE7 527 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 AGPAT5Q9NUQ2 364 aa25.57■■□□□ 1.68
VAPA-205ENST00000578314 DBR1Q9UK59 544 aaKnown RBP25.57■■□□□ 1.68
VAPA-205ENST00000578314 PTENP60484 403 aa25.56■■□□□ 1.68
VAPA-205ENST00000578314 UBE3AQ05086 875 aa25.56■■□□□ 1.68
VAPA-205ENST00000578314 NBR1Q14596 966 aa25.56■■□□□ 1.68
VAPA-205ENST00000578314 PCBP1Q15365 356 aaKnown RBP eCLIP25.56■■□□□ 1.68
VAPA-205ENST00000578314 IFNLR1Q8IU57 520 aaPredicted RBP25.56■■□□□ 1.68
VAPA-205ENST00000578314 LRRC43Q8N309 656 aa25.56■■□□□ 1.68
VAPA-205ENST00000578314 RSPH1Q8WYR4 309 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms