RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 MARSP56192 900 aaKnown RBP20.39■□□□□ 0.86
PRKCA-203ENST00000578063 SNRPFP62306 86 aaKnown RBP20.39■□□□□ 0.86
PRKCA-203ENST00000578063 BRDTQ58F21 947 aaPredicted RBP20.39■□□□□ 0.86
PRKCA-203ENST00000578063 TUT1Q9H6E5 874 aaKnown RBP20.39■□□□□ 0.86
PRKCA-203ENST00000578063 CASP8AP2Q9UKL3 1982 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 CYBAP13498 195 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 PRKCSHP14314 528 aaPredicted RBP20.39■□□□□ 0.85
PRKCA-203ENST00000578063 CPT1AP50416 773 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 CCDC40Q4G0X9 1142 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 IER5Q5VY09 327 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 MAP4K3Q8IVH8 894 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 KSR1Q8IVT5 923 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 AP5M1Q9H0R1 490 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 RNPEPQ9H4A4 650 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 AGPAT3Q9NRZ7 376 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 ARHGAP28Q9P2N2 729 aa20.39■□□□□ 0.85
PRKCA-203ENST00000578063 DENND3A2RUS2 1198 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 SLC16A3O15427 465 aaKnown RBP20.38■□□□□ 0.85
PRKCA-203ENST00000578063 GNRH1P01148 92 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 GLRA2P23416 452 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 GSDMDP57764 484 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 MYBPC2Q14324 1141 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 MAN2A1Q16706 1144 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 SPECC1LQ69YQ0 1117 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 NOC4LQ9BVI4 516 aaKnown RBP20.38■□□□□ 0.85
PRKCA-203ENST00000578063 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 TBX20Q9UMR3 447 aa20.38■□□□□ 0.85
PRKCA-203ENST00000578063 GPR25O00155 361 aa20.37■□□□□ 0.85
PRKCA-203ENST00000578063 TEX33O43247 280 aa20.37■□□□□ 0.85
PRKCA-203ENST00000578063 ASAP3Q8TDY4 903 aa20.37■□□□□ 0.85
PRKCA-203ENST00000578063 TMEM174Q8WUU8 243 aa20.37■□□□□ 0.85
PRKCA-203ENST00000578063 KIFC3Q9BVG8 833 aa20.37■□□□□ 0.85
PRKCA-203ENST00000578063 MAGEB2O15479 319 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 DUSP11O75319 330 aaKnown RBP20.36■□□□□ 0.85
PRKCA-203ENST00000578063 INSRRP14616 1297 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 PBX1P40424 430 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 DNM2P50570 870 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 MXD4Q14582 209 aaPredicted RBP20.36■□□□□ 0.85
PRKCA-203ENST00000578063 SLC9A9Q8IVB4 645 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 C12orf56Q8IXR9 622 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 RETREG2Q8NC44 543 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 TRPV1Q8NER1 839 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 DEPTORQ8TB45 409 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 CD99L2Q8TCZ2 262 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 PSPC1Q8WXF1 523 aaKnown RBP20.36■□□□□ 0.85
PRKCA-203ENST00000578063 LENG1Q96BZ8 264 aaPredicted RBP20.36■□□□□ 0.85
PRKCA-203ENST00000578063 ITIH6Q6UXX5 1313 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 ADGRA3Q8IWK6 1321 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 CLIC2O15247 247 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 C22orf31O95567 290 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 F2P00734 622 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 EPB41P11171 864 aaKnown RBP20.36■□□□□ 0.85
PRKCA-203ENST00000578063 CAP1Q01518 475 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 UBXN1Q04323 297 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 FRMD5Q7Z6J6 570 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 ERO1AQ96HE7 468 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 MKNK1Q9BUB5 465 aa20.36■□□□□ 0.85
PRKCA-203ENST00000578063 METTL14Q9HCE5 456 aaKnown RBP20.36■□□□□ 0.85
PRKCA-203ENST00000578063 A0A1W2PQC6 194 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 LRRIQ4A6NIV6 560 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 PES1O00541 588 aaKnown RBP20.35■□□□□ 0.85
PRKCA-203ENST00000578063 ARHGEF6Q15052 776 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 VWA3BQ502W6 1294 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 MIIPQ5JXC2 388 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 FKBP15Q5T1M5 1219 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 CCDC150Q8NCX0 1101 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 TRAPPC12Q8WVT3 735 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 SUGCTQ9HAC7 445 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 DMAC2Q9NW81 257 aa20.35■□□□□ 0.85
PRKCA-203ENST00000578063 SEPT4O43236 478 aa20.34■□□□□ 0.85
PRKCA-203ENST00000578063 PPP2R3AQ06190 1150 aa20.34■□□□□ 0.85
PRKCA-203ENST00000578063 PPFIA1Q13136 1202 aa20.34■□□□□ 0.85
PRKCA-203ENST00000578063 CAPSQ13938 189 aa20.34■□□□□ 0.85
PRKCA-203ENST00000578063 TRIM59Q8IWR1 403 aa20.34■□□□□ 0.85
PRKCA-203ENST00000578063 PRPF31Q8WWY3 499 aaKnown RBP20.34■□□□□ 0.85
PRKCA-203ENST00000578063 IKZF4Q9H2S9 585 aa20.34■□□□□ 0.85
PRKCA-203ENST00000578063 ARMCX3Q9UH62 379 aaPredicted RBP20.34■□□□□ 0.85
PRKCA-203ENST00000578063 PHLPP2Q6ZVD8 1323 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 AKAP3O75969 853 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 PSMC2P35998 433 aaKnown RBP20.33■□□□□ 0.85
PRKCA-203ENST00000578063 IGBP1P78318 339 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 STRN3Q13033 797 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 MKRN4PQ13434 485 aaPredicted RBP20.33■□□□□ 0.85
PRKCA-203ENST00000578063 DRP2Q13474 957 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 FSCN1Q16658 493 aaKnown RBP20.33■□□□□ 0.85
PRKCA-203ENST00000578063 CEP135Q66GS9 1140 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 LRRC71Q8N4P6 559 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 NDST4Q9H3R1 872 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 SUCLA2Q9P2R7 463 aaPredicted RBP20.33■□□□□ 0.85
PRKCA-203ENST00000578063 FRMD4BQ9Y2L6 1034 aa20.33■□□□□ 0.85
PRKCA-203ENST00000578063 RRN3P2A6NIE6 340 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 ASAP2O43150 1006 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 ADCY3O60266 1144 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 FKTNO75072 461 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 TBX2Q13207 712 aaPredicted RBP20.33■□□□□ 0.84
PRKCA-203ENST00000578063 TFDP1Q14186 410 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 GRIK4Q16099 956 aa20.33■□□□□ 0.84
PRKCA-203ENST00000578063 PTPN21Q16825 1174 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms