RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 OTUD6AQ7L8S5 288 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 ABI1Q8IZP0 508 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 SMRP1Q8NCR6 262 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 NLRP7Q8WX94 980 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 SLC7A3Q8WY07 619 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 STK39Q9UEW8 545 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 CD207Q9UJ71 328 aa16.25■□□□□ 0.19
SMARCE1-213ENST00000578044 RBAK-RBAKDNI3L0D1 243 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 EML1O00423 815 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 MBTPS2O43462 519 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 CCNT1O60563 726 aaKnown RBP16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 TBX10O75333 385 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 KRT2P35908 639 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 ORC2Q13416 577 aaPredicted RBP16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 KCNC3Q14003 757 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 MTERF2Q49AM1 385 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 SRGAP1Q7Z6B7 1085 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 MRPS27Q92552 414 aaKnown RBP16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 EPHX3Q9H6B9 360 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 ZSWIM4Q9H7M6 989 aa16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 SUCLA2Q9P2R7 463 aaPredicted RBP16.24■□□□□ 0.19
SMARCE1-213ENST00000578044 DDX11L8A8MPP1 907 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 FGFR1P11362 822 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 XRCC6P12956 609 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 ATF7P17544 494 aaPredicted RBP16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 PHKA2P46019 1235 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 GATMP50440 423 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 KRT17Q04695 432 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 DRP2Q13474 957 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 ME3Q16798 604 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 KCNT2Q6UVM3 1135 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 PIK3AP1Q6ZUJ8 805 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 NSUN7Q8NE18 718 aaKnown RBP16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 TCP11Q8WWU5 503 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 GJA10Q969M2 543 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 ZNF558Q96NG5 402 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 IFT122Q9HBG6 1241 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 ARID2Q68CP9 1835 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 MUC6Q6W4X9 2439 aa16.23■□□□□ 0.19
SMARCE1-213ENST00000578044 A0A087WZ62 844 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 PRR33A8MZF0 331 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 SRGAP2BP0DMP2 458 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 IRS1P35568 1242 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 DLX2Q07687 328 aaPredicted RBP16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 MXD4Q14582 209 aaPredicted RBP16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 DUSP6Q16828 381 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 CLLU1OSQ5K130 101 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 SPOUT1Q5T280 376 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 LRRC55Q6ZSA7 311 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 IFNLR1Q8IU57 520 aaPredicted RBP16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 THNSL1Q8IYQ7 743 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 OXER1Q8TDS5 423 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 PSPC1Q8WXF1 523 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 SCLT1Q96NL6 688 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 HSD17B14Q9BPX1 270 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 FDXACB1Q9BRP7 624 aaPredicted RBP16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 LRFN3Q9BTN0 628 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 TLE6Q9H808 572 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 SPG21Q9NZD8 308 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 CLEC1BQ9P126 229 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 COL4A3BPQ9Y5P4 624 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 IRAK3Q9Y616 596 aa16.22■□□□□ 0.19
SMARCE1-213ENST00000578044 GLP2RO95838 553 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 HOXB8P17481 243 aaPredicted RBP16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 YWHABP31946 246 aaKnown RBP16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 NDUFV1P49821 464 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 POLGP54098 1239 aaPredicted RBP16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 CBX2Q14781 532 aaPredicted RBP16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 MRPL10Q7Z7H8 261 aaKnown RBP16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 CCDC51Q96ER9 411 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 CEP170P1Q96L14 293 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 LXNQ9BS40 222 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 NFKBIZQ9BYH8 718 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 C11orf16Q9NQ32 467 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 ANKEF1Q9NU02 776 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 AGPAT5Q9NUQ2 364 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 PCDHA12Q9UN75 941 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 ZNF318Q5VUA4 2279 aa16.21■□□□□ 0.19
SMARCE1-213ENST00000578044 CNTNAP2Q9UHC6 1331 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 DCXO43602 365 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 SLITRK3O94933 977 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 AXLP30530 894 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 SSTR3P32745 418 aaPredicted RBP16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 NRIP1P48552 1158 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 NEK4P51957 841 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 GIT2Q14161 759 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 BMS1Q14692 1282 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 HERC4Q5GLZ8 1057 aaPredicted RBP16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 ADGRD2Q7Z7M1 963 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 RHPN2Q8IUC4 686 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 SLC39A11Q8N1S5 342 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 CNNM3Q8NE01 707 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 SUSD6Q92537 303 aa16.2■□□□□ 0.18
SMARCE1-213ENST00000578044 KHSRPQ92945 711 aaKnown RBP eCLIP16.2■□□□□ 0.186e-7■■■■■ 30.3
SMARCE1-213ENST00000578044 PGBD4Q96DM1 585 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms