RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 SEC16BQ96JE7 1060 aa15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 ELAC2Q9BQ52 826 aaKnown RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 METTL14Q9HCE5 456 aaKnown RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 PDXKO00764 312 aa15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 ACSL3O95573 720 aa15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 FTLP02792 175 aaPredicted RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 RPSAP08865 295 aaKnown RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 CLK2P49760 499 aaKnown RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 IFI35P80217 286 aaPredicted RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 PPP1R7Q15435 360 aa15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 ABCB5Q2M3G0 1257 aa15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 GKAP1Q5VSY0 366 aaPredicted RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 PSMD1Q99460 953 aa15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 PAIP2Q9BPZ3 127 aaKnown RBP15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 KCNMB3Q9NPA1 279 aa15.94■□□□□ 0.14
CUEDC1-206ENST00000577830 UTRNP46939 3433 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 CLRN2A0PK11 232 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 TMEM150BA6NC51 233 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 K7ENM7 598 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 OPLAHO14841 1288 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 BBOX1O75936 387 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 ECE1P42892 770 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 FMO5P49326 533 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 ZKSCAN8Q15776 578 aaPredicted RBP15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 TMC3Q7Z5M5 1100 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 COL23A1Q86Y22 540 aaPredicted RBP15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 TCP11Q8WWU5 503 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 INTS2Q9H0H0 1204 aaKnown RBP15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 TCP10L2B9ZVM9 353 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 SLC29A2Q14542 456 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 EPC2Q52LR7 807 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 KIRREL3Q8IZU9 778 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 ADAM33Q9BZ11 813 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 PARVGQ9HBI0 331 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 ARHGEF35A5YM69 484 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 MMEP08473 750 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 CLTAP09496 248 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 ECHS1P30084 290 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 MAP2K2P36507 400 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 DLG4P78352 724 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 SYDE2Q5VT97 1194 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 ACTRT1Q8TDG2 376 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 ALG3Q92685 438 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 POP1Q99575 1024 aaKnown RBP15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 DNAJC18Q9H819 358 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 KLC4Q9NSK0 619 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 TBK1Q9UHD2 729 aa15.93■□□□□ 0.14
CUEDC1-206ENST00000577830 TGFB1I1O43294 461 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 SNHG28P0DPA3 235 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 CHN1P15882 459 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 CPXCR1Q8N123 301 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 EPS8L3Q8TE67 593 aaKnown RBP15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 SLC40A1Q9NP59 571 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 SWAP70Q9UH65 585 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 TCEAL9Q9UHQ7 104 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 F8VZ95 297 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 TNFRSF8P28908 595 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 MTMR3Q13615 1198 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 GIMAP7Q8NHV1 300 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 SLC30A5Q8TAD4 765 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 SEMA4AQ9H3S1 761 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 ATF5Q9Y2D1 282 aaPredicted RBP15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 ALG6Q9Y672 507 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 ADRA2BP18089 450 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 HIBCHQ6NVY1 386 aaPredicted RBP15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 ETNPPLQ8TBG4 499 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 RUBCNQ92622 972 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 RAB17Q9H0T7 212 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 SIX2Q9NPC8 291 aa15.92■□□□□ 0.14
CUEDC1-206ENST00000577830 A6NNZ2 444 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 CCDC188H7C350 402 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 BMP3P12645 472 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 TUBB8Q3ZCM7 444 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 APOBEC3HQ6NTF7 200 aaKnown RBP15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 PPP1R18Q6NYC8 613 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 CAPN12Q6ZSI9 719 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 RPUSD2Q8IZ73 545 aaKnown RBP15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 ZSWIM2Q8NEG5 633 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 RFFLQ8WZ73 363 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 GAKO14976 1311 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 EMSYQ7Z589 1322 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 LMNB1P20700 586 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 PMS2P54278 862 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 GDAP1Q8TB36 358 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 C1orf54Q8WWF1 131 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 PRMT1Q99873 361 aaKnown RBP15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 TRAF3IP3Q9Y228 551 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 CRY2Q49AN0 593 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 C10orf76Q5T2E6 689 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 CCDC91Q7Z6B0 441 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 TBC1D1Q86TI0 1168 aaPredicted RBP15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 JAMLQ86YT9 394 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 NAP1L4Q99733 375 aaKnown RBP15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 FAM114A2Q9NRY5 505 aa15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 INTS9Q9NV88 658 aaKnown RBP15.91■□□□□ 0.14
CUEDC1-206ENST00000577830 TCRBV7S2A1N4TA0A589 114 aa15.9■□□□□ 0.14
CUEDC1-206ENST00000577830 DNM1LO00429 736 aa15.9■□□□□ 0.14
CUEDC1-206ENST00000577830 DCAF12L1Q5VU92 463 aa15.9■□□□□ 0.14
CUEDC1-206ENST00000577830 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms